Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 618 a.a., type VI secretion system tip protein VgrG from Dickeya dianthicola ME23

 Score =  482 bits (1240), Expect = e-140
 Identities = 261/618 (42%), Positives = 362/618 (58%), Gaps = 38/618 (6%)

Query: 17  TEFEVVSFKLDETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRHVHGLVS 76
           T F VV F+L E LNQPF L+L L S ++DIDFG VLD+P    ++      R V G+VS
Sbjct: 19  TTFAVVDFELSEALNQPFALSLNLASSQADIDFGAVLDQPCELRVWYEGELQRRVSGIVS 78

Query: 77  AFSQGETGFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITRFELKSS 136
            F+QG+TGF RTRY A V P L R  LR+N R+FQ +    I+  + +  GIT F     
Sbjct: 79  RFAQGDTGFRRTRYQAEVRPALWRLGLRTNARLFQTRKPDAIISTLLEEAGITDFAFALR 138

Query: 137 AQHQVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLLSRGALK 196
             H  RE+CVQ  E+DL FIHRLAAEEG  Y  E  A +H ++  D     G LS+G   
Sbjct: 139 HDHAAREYCVQYRESDLAFIHRLAAEEGLFYFHEFEAGKHRVVFAD---DAGALSKGP-- 193

Query: 197 AEDDEALWLDEDDVGPDKVLYHASSGGDQARACLRRLRYCEQVRTARQVQRDYTFTNPAY 256
                            ++ ++ ++ G    A +RR RY E V TA    +DY+F  PAY
Sbjct: 194 -----------------ELFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAY 236

Query: 257 RQEHKAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAEVQGDDVRL 316
              H   +S + HQ   Y+ FDYPGR+K+D  GK FT  RL ALR  A     + +   L
Sbjct: 237 GLLHNRMSSELDHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGAGESNAAAL 296

Query: 317 QTGLSFTLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQGTRYVNDALLVQGMAE 376
             G SFTL  HP    N+ W+V+++ H G Q  +L+EE+ G  + T   N   +V+    
Sbjct: 297 MPGSSFTLTEHPNAAFNLAWQVVAVTHSGQQPQALEEESGG--EPTTLSNRFEVVKATTT 354

Query: 377 WRPAPMAKPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWVSQG 436
           WR A   KPR+DGP +ATVVGP GEEIYCD++GR+K+ FPWDR   +++ SSCWV VSQG
Sbjct: 355 WRAAMPYKPRVDGPQIATVVGPAGEEIYCDQYGRIKLQFPWDRYGASDDQSSCWVRVSQG 414

Query: 437 WAGGSWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIKSQT 496
           WAGG +G +AIPRIG +V+V ++ GDPDQP++TGRT+      PY LP +KTR +++++T
Sbjct: 415 WAGGQYGLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTRT 474

Query: 497 HKGDGFNELRFEDELGRQEVFIHAERDQNNVVKHNETTL--------IGNDRSERVEHDE 548
           HKG GFNELRFED+ G++EVFIHA++D N VV +N +T         +G D++  V+H++
Sbjct: 475 HKGAGFNELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTAVNASHSENVGGDQTVVVQHNQ 534

Query: 549 VVDIGGNRSVKVGASKRETVALGKVESIGLGKSLAVGGALSVMVGLEATEQVALDKRVQV 608
            V I  N+   +  ++   V  G+  S+    +L V G ++V   +     + L      
Sbjct: 535 TVSIEQNQHTGIKGTQNINVGNGRQTSVTTTDTLTVSGDVTV---VSTGGNIRLS---TA 588

Query: 609 GGQLRVDADEDVSITSHH 626
           GG + +D   D+SI  +H
Sbjct: 589 GGYISIDHAGDISIVGNH 606