Pairwise Alignments

Query, 424 a.a., Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) from Pseudomonas putida KT2440

Subject, 436 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC 1.3.1.1) from Variovorax sp. SCN45

 Score =  580 bits (1496), Expect = e-170
 Identities = 280/433 (64%), Positives = 328/433 (75%), Gaps = 14/433 (3%)

Query: 1   MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAVNVSS-R 59
           MADLSI F GI++PNPFWLASAPPTDK  NVVRAFEAGWGGVVWKT+GEDP  VNV   R
Sbjct: 1   MADLSIDFVGIRSPNPFWLASAPPTDKEINVVRAFEAGWGGVVWKTVGEDPNVVNVHGPR 60

Query: 60  YSAHYGPNRQVQGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCIEESWKFI 119
           Y+  Y  +R+V G NNIELI+DR L  NL E+T+VK++WPDRAL+ S+MVPC EESWK I
Sbjct: 61  YAVSYAADRRVTGFNNIELISDRPLRTNLEEMTRVKRNWPDRALVASVMVPCTEESWKNI 120

Query: 120 LPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCALPVIVKLTPN 179
           LP++E TG DG+ELNFGCPHGM ERGMGAAVGQVPEY++MV  WCK Y  LP+IVKLTPN
Sbjct: 121 LPMIEDTGCDGLELNFGCPHGMSERGMGAAVGQVPEYIQMVAEWCKHYSKLPLIVKLTPN 180

Query: 180 ITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVKPIA 239
           + DIR +ARAA +GGADAVSLINTINSI  VDLD M   P  G   +HGGYCG   KPIA
Sbjct: 181 VADIRPAARAAKKGGADAVSLINTINSIMGVDLDAMAMFPNTGGMGSHGGYCGPGAKPIA 240

Query: 240 LNMVAEIARDPETRGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFRIVEDMQD 299
           L+MVAEIARDP+T GLPI GIGG+  WRDAAEF+ALGSG+VQVCTAAM++GF+IV+D+ D
Sbjct: 241 LHMVAEIARDPQTAGLPISGIGGVSTWRDAAEFIALGSGSVQVCTAAMVYGFKIVQDLCD 300

Query: 300 GLARWMDQHGHATVEAFRGQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHIACEDTS 359
           GL+ +MD+ G+  +E  RG+A+G  TDWK L++N+   A I Q+ACI CGRCH+ CEDTS
Sbjct: 301 GLSNFMDEKGYQNLEQLRGRAIGSITDWKELNLNHVDKAVIHQDACIQCGRCHVVCEDTS 360

Query: 360 HQAIASTLKADGTHAYSVIEEECVGCNLCQITCPVENCIEMEA-------QDTGKP---- 408
           HQAI +T   DG   + V EEECVGCNLC   CPV   + M           TG P    
Sbjct: 361 HQAITAT--KDGMRYFEVKEEECVGCNLCVSICPVPGALSMRTLKPGEVDARTGHPVVAQ 418

Query: 409 YLNWTQDPRNPYR 421
           Y NWT  P NP R
Sbjct: 419 YANWTTHPNNPMR 431