Pairwise Alignments

Query, 455 a.a., NADP-dependent dihydropyrimidine dehydrogenase subunit from Pseudomonas putida KT2440

Subject, 653 a.a., Glutamate synthase [NADPH] small chain (EC 1.4.1.13) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  191 bits (486), Expect = 5e-53
 Identities = 149/460 (32%), Positives = 213/460 (46%), Gaps = 30/460 (6%)

Query: 11  PRAGADQLA-----ERFSDLAPPLTARQAALESARCLYCYD-APCVNACPSEIDIPSFIH 64
           PR   D+LA       F ++  P  A QA  E++RCL C + + C   CP    IP +I 
Sbjct: 192 PRGEPDKLAIEARKTTFEEIYLPFRAAQAEREASRCLTCGEHSICEWTCPLHNHIPQWIE 251

Query: 65  RISDENLQGAAERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALD 124
            +   ++  A E     N L     RVCP + LC+ AC   +  E   V IG ++RY  D
Sbjct: 252 LVKAGDIDAAVELSHQTNCLPEITGRVCPQDRLCEGACTLRD--EYGAVTIGNIERYISD 309

Query: 125 NAQFSAHPFKRSAA--TGKRIAVVGAGPAGLSCAHRLAMHGHDVVVFEACDKAGGLNEYG 182
            A         S    + KR+A++GAGPAGL+CA  LA HG    V++   + GGL  +G
Sbjct: 310 RALSKGWRPDLSDVQKSDKRVAIIGAGPAGLACADVLARHGVSATVYDRHPEIGGLLTFG 369

Query: 183 IARYKLVDDYAQREVDFLLGIGGIEVRHGQRLGGNLSLGELRDQYDAVFLGLGLNAVRQL 242
           I  +KL      R  +    + GI       +G ++SL  L + YDAVF+G+G     + 
Sbjct: 370 IPAFKLDKSLLARRREIFSAM-GIRFELNCEVGKDISLETLLESYDAVFVGVGTYRSMKA 428

Query: 243 GLPDEEAPGVVAATEY-IRELRQADDLSQLP-------LADRCLVIGAGNTAIDMAVQMS 294
            LP+E+APGV  A  + I   +Q   L  LP            +V+G G+TA+D      
Sbjct: 429 DLPNEDAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTAMDCVRTAL 488

Query: 295 RLGARDVNLVYRRGHADMGATGHEQDIAKANQVRLHTWARPDAVLLDDAGKVRGMRFART 354
           R GA +V   YRR  A+M  +  E   A+          +P  ++LD  G+  G+RF RT
Sbjct: 489 RHGAANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRASGIRFLRT 548

Query: 355 ELAE----GRLRDT---GETFELAADAIFKAIGQRFDDASLGDPVAAQL---AREGERIR 404
            L E    GR R        F + ADA+  A G      S  +    ++    R    + 
Sbjct: 549 RLGEPDGQGRRRPVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNWGRIAASVE 608

Query: 405 VDENLQTSLPGVYAGGDCTALGQDLTVQAVQHGKLAAEAI 444
            +   QTS P ++AGGD    G DL V A+  G+ AA+ I
Sbjct: 609 SEFRYQTSNPKIFAGGDAVR-GADLVVTAMAEGRHAAQGI 647



 Score = 29.3 bits (64), Expect = 4e-04
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 10/53 (18%)

Query: 41 CLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAAERILSANILGGSCARVCP 93
          C +C DAPC  +CP+       I  I+D ++Q  A++ +       SC   CP
Sbjct: 56 CHHCEDAPCARSCPN-----GAIAHIND-SVQVNAQKCIGCK----SCVVACP 98