Pairwise Alignments

Query, 496 a.a., putative PydP transporter, NCS1 nucleoside transporter family from Pseudomonas putida KT2440

Subject, 484 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  196 bits (497), Expect = 2e-54
 Identities = 131/468 (27%), Positives = 228/468 (48%), Gaps = 28/468 (5%)

Query: 29  YNPDIAPTKVHQRTWNKWHITALWVGMSICVPTYTLGGVLTAYFGLSVGEALLAILLANV 88
           Y+ D+ P    QRTW  ++   LW+G    VP Y + G      GLS    +LAI+L+  
Sbjct: 13  YSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFI-LGLSTFSIMLAIILSAF 71

Query: 89  IVLIPLTLNAFPGTKYGIPFPVLLRSSFGILGSNVPCLIRA-VVACGWFGIQTMFGGLAI 147
            +   + LN   G+KYG+PF ++LR+S+G+ G+  P L+R  + A  WFG+Q   G LA 
Sbjct: 72  FIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLAC 131

Query: 148 HLFLGSVFDGWKALGGTGEVIG--------FMIFWCLNLWVVLRGAESIKWLETLSAPLL 199
            + +G ++ G+  LGG   ++G        F+IFW +N+ +   G + +     +  P +
Sbjct: 132 LILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCI 191

Query: 200 VAVGVGLLFWALPHMSMTELLAQPPKRPEGASVVSY-FCAGLTAMVGFWATLSLNIPDFS 258
             V  G+  WA+  + +  +    P   + A    + F   + A+V  WA  +++  DF+
Sbjct: 192 YIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENGGFLFLVVINAVVAVWAAPAVSASDFT 251

Query: 259 RYARSQKDQILGQIFGLPLTMFLFAALGVVLTAASASLVGETVSDPVSLIGKIQSPFWVA 318
           + A S ++Q LGQ  GL +   LFA  GV + A ++   G    + + ++ +  S F   
Sbjct: 252 QNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASF 311

Query: 319 LAMALIVIATLSTNTAANIVSPTNDFQNIAPRLIGRSRAVWLTGFIGLALMGHELLKKLG 378
            A+ +I++ T+STN   NI+        IAP  +     V +   I L +   +L++   
Sbjct: 312 FAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLME--- 368

Query: 379 LIVSDLSLESVYSNWLLGYSSLLGPIAGIMVVDYFLIRRQKLDLAGLYR--DDVYPAWNW 436
                 + +S+Y  +L     +LGP+ G+M+  YF++ R +++L  LY    D     N 
Sbjct: 369 ------NQDSIYL-FLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNG 421

Query: 437 AGFAAFALPVGLTVMAIGNSSFSWFYD----YGWFTGSLLGGALYAAL 480
               AF++ +   ++++G   F  F +      WF G ++  A YA L
Sbjct: 422 FNLTAFSVTLVAVILSLG-GKFIHFMEPLSRVSWFVGVIVAFAAYALL 468