Pairwise Alignments

Query, 496 a.a., putative PydP transporter, NCS1 nucleoside transporter family from Pseudomonas putida KT2440

Subject, 419 a.a., cytosine permease from Escherichia coli ECOR38

 Score = 81.6 bits (200), Expect = 5e-20
 Identities = 97/404 (24%), Positives = 165/404 (40%), Gaps = 58/404 (14%)

Query: 48  ITALWVGMSICVPTYTLGGVLTAYFGLSVGEALLAILLANVIVLIPLTLNAFPGTKYGIP 107
           +T + +G++    +   GG L    GLS  +  LA+L+ N+++ I  +   + G K G+ 
Sbjct: 23  LTFVMLGLTFFSASMWTGGTLGT--GLSYHDFFLAVLIGNLLLGIYTSFLGYIGAKTGLT 80

Query: 108 FPVLLRSSFGILGSNVPCLIRAVVACGWFGIQTMFGGLAIHLFLGSVFDGWKALGGTGEV 167
             +L R SFG+ GS +P L+      GWFG+      + +    G   +   A+ G    
Sbjct: 81  THLLARFSFGVKGSWLPSLLLGGTQVGWFGVGVAMFAIPVGKATGLDINLLIAVSGV--- 137

Query: 168 IGFMIFWCLNLWVVLRGAESIKWLETLSAPLLVAVGVGLLFWALPHMSMTELL-AQPPKR 226
                   L    V  G  ++  L  ++ P +  +G   ++ A+  M   E L A  P +
Sbjct: 138 --------LMTVTVFFGISALTVLSVIAVPAIACLGGYSVWLAVNGMGGLEALKAVVPAQ 189

Query: 227 PEGASVVSYFCAGLTAMVGFWATLSLNIPDFSRYARSQKDQILGQIFGLPLTMFLFAALG 286
           P   +V       L  +VG + +      DF R+ R+ K  +L  +    +  FL  +L 
Sbjct: 190 PLDFNVA------LALVVGSFISAGTLTADFVRFGRNAKLAVLVAM----VAFFLGNSLM 239

Query: 287 VVLTAASASLVGET-VSDPVSLIGKIQSPFWVALAMALIVIATLSTNTAANIVSPTNDFQ 345
            +  AA A+ +G   +SD +           +A  + L  I  L  N     +  TND  
Sbjct: 240 FIFGAAGAAALGMADISDVM-----------IAQGLLLPAIVVLGLN-----IWTTNDNA 283

Query: 346 NIAPRLIGRSRAVWLTGFIGLALMGHELLKKLGLIVSDLSLESVYSN---WLLGYSSLLG 402
             A  L          GF  +  M  + L  +  I+  +    +Y+N   WL   S+ + 
Sbjct: 284 LYASGL----------GFANITGMSSKTLSVINGIIGTVCALWLYNNFVGWLTFLSAAIP 333

Query: 403 PIAGIMVVDYFLIRRQKLDLAGLYRDDVYPAWNWAGFAAFALPV 446
           P+ G+++ DY + RR+    A      V    NW    A AL +
Sbjct: 334 PVGGVIIADYLMNRRRYEHFATTRMMSV----NWVAILAVALGI 373



 Score = 31.2 bits (69), Expect = 7e-05
 Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 17/99 (17%)

Query: 355 SRAVWLTGFIGLALMGHELLKKLGLIVSDLSLESVYSNWLLG-YSSLLGPIAGIMVVDYF 413
           S ++W  G +G  L  H           D  L  +  N LLG Y+S LG I     +   
Sbjct: 34  SASMWTGGTLGTGLSYH-----------DFFLAVLIGNLLLGIYTSFLGYIGAKTGLTTH 82

Query: 414 LIRRQKLDLAG-----LYRDDVYPAWNWAGFAAFALPVG 447
           L+ R    + G     L        W   G A FA+PVG
Sbjct: 83  LLARFSFGVKGSWLPSLLLGGTQVGWFGVGVAMFAIPVG 121