Pairwise Alignments

Query, 319 a.a., Ribonuclease Z from Pseudomonas putida KT2440

Subject, 318 a.a., Ribonuclease Z (EC 3.1.26.11) from Variovorax sp. SCN45

 Score =  241 bits (615), Expect = 2e-68
 Identities = 136/314 (43%), Positives = 181/314 (57%), Gaps = 5/314 (1%)

Query: 1   MDLLFLGTSAGVPTKARNVSATAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI 60
           M L FLGTS+G PT+ RNVS  AV    G+ W L+DCGEGTQHR+L TPLS+ DL A+ I
Sbjct: 2   MKLTFLGTSSGTPTRHRNVSGLAVQTVLGADWVLIDCGEGTQHRVLQTPLSLNDLAAVCI 61

Query: 61  THVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQGLVASDTFLPFELRLLPVE 120
           THVHGDHC+GLPGLLASAGM+ RT+PL++I P  +  W       +D  LP+E+  + ++
Sbjct: 62  THVHGDHCYGLPGLLASAGMNKRTKPLKLIAPLPVWQWFEATRALTDLHLPYEVEHVNLD 121

Query: 121 -ELIAWRSETLQVTTVQLSHRVPSVGFVFTEINPEPRLDIQRLDAEGITRGPLWGELAKG 179
              + +    + + +  L HRVPS  +         RL    L A G+  GP W  L  G
Sbjct: 122 GPSLVYEVPGVCIESHALLHRVPSHAYRVQVETRRVRLKADALRAIGLPPGPAWRALQTG 181

Query: 180 LTVTYDGQLLNGNDYLRPSRPPRRVIVCGDNDKPELLAAVARGADVLVHEATFTQAVVER 239
             V ++G +L   DY          ++ GDN +P LL    + A +LVHEATFTQ  +++
Sbjct: 182 EDVPFNGDVLRSADYTDAQVEAVAAVMGGDNAEPALLRDACKSAQLLVHEATFTQDALDK 241

Query: 240 TGGTFGHSTAAEVARFAEAAGVRNLVLTHFSARYQNDPRRSPHIDNVRDEALAHYSGQLT 299
            G    HS+A  +A FA+A  V NL+LTHFSAR+QN+   +     +  E  A YSG   
Sbjct: 242 VGPGPMHSSARLLAEFAQAVEVPNLILTHFSARHQNEEGMAA----LMAETQACYSGHAF 297

Query: 300 LAQDLQRYHLGRNG 313
           LA DL  Y L   G
Sbjct: 298 LANDLDVYELDGAG 311