Pairwise Alignments

Query, 653 a.a., DNA topoisomerase III from Pseudomonas putida KT2440

Subject, 674 a.a., DNA topoisomerase III from Dickeya dianthicola ME23

 Score =  617 bits (1592), Expect = 0.0
 Identities = 318/622 (51%), Positives = 421/622 (67%), Gaps = 3/622 (0%)

Query: 1   MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDICVTWCIGHLLETAPPDSYDERY-KRW 59
           MRLFLCEKPSQ +DIA VLGA+++G G   G D  VTW +GHLLE A P+ Y E+Y K W
Sbjct: 1   MRLFLCEKPSQGRDIAAVLGASKRGQGFLSGPDTVVTWAVGHLLENAMPELYGEQYGKPW 60

Query: 60  NLADLPIIPDKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRY 119
            L  LP++P KW+M+VK  TA QF  + RLL ++ E+VIATDADREGE+IAREL+E+CR+
Sbjct: 61  RLDVLPLLPQKWQMVVKKDTADQFAVITRLLKQSDEVVIATDADREGEVIARELLEYCRF 120

Query: 120 RGPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGR 179
            G V RLWLSALD+AS+RKALA + PG+ET NLY++ LGR RADWLIGMN+SRL+TL  R
Sbjct: 121 NGVVSRLWLSALDEASVRKALANIRPGNETENLYYAGLGRGRADWLIGMNISRLYTLKAR 180

Query: 180 QSGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPVPFWAIDVQLEHAGQRFNAQWRAPEDA 239
           + GY GVL VGRVQTP L LVV+RDR IA+FVP P++ ++V+LE  G  F A+W A    
Sbjct: 181 ELGYDGVLSVGRVQTPALALVVNRDRLIASFVPKPYFQVNVKLESGGVVFPAEWVAAAAY 240

Query: 240 CDDQGRCLKQSLAQQAAADIGHAGTARAVKVATERVREAAPLPFDLGTLQELCSKKFGLG 299
            D + RC+ Q++A+Q        G A  + V  +R +  APL F LG LQ++C+++FG  
Sbjct: 241 TDGERRCVNQAVAEQVRKLCLTVGKAVILDVEKKREKIPAPLAFSLGVLQQVCAERFGYS 300

Query: 300 AQETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILAALQRADASLAPLQPYLEPQ 359
            Q+ LD AQALYETHK  TYPR+DCGYLP+S  +E P +L+ALQ++D SLAP+   ++P 
Sbjct: 301 PQQVLDTAQALYETHKATTYPRTDCGYLPESMLSEVPHVLSALQQSDPSLAPVIASIDPS 360

Query: 360 RRSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQAD 419
            RSR W+D K++AHH IIPT    + + +    + VYTLIR  YLAQF+P  E D T+A 
Sbjct: 361 FRSRIWDDKKITAHHAIIPTPHKCNLAGMNEAERNVYTLIRTHYLAQFMPLLEMDVTRAS 420

Query: 420 FDCAGHALRAVGKQIVEPGWRRALPE-ALTPAKGREAPPAQV-LPALREGQDCNVHGLQL 477
           F+  G   R  G+  V PGW+    + A + +  R+   A V LP L +   C + G +L
Sbjct: 421 FNIGGQLFRTSGRVTVVPGWKTLFGQAAASDSDERDDEAAAVSLPPLTKDAVCGIRGAEL 480

Query: 478 KDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLDRGY 537
           K L T+PP+P++   LI AM N A LVDDP LK+ L++  G+GTEATRA I+  L+ RG+
Sbjct: 481 KALKTKPPQPYSFKTLIAAMMNAAGLVDDPALKKVLRDNAGLGTEATRAGILDVLMKRGF 540

Query: 538 LVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMPLEEFVARQSAWMG 597
           L+K G  L A+  A  L+DA+P A+   G TA+WEQALD + +G+M L+ FV RQ  W+ 
Sbjct: 541 LIKKGNHLHASDTACDLVDALPAALTQVGMTALWEQALDDIAAGKMTLDSFVDRQLRWVN 600

Query: 598 KLVERCSGMRMTISGPAAGAAP 619
           +LVE+      TI  P     P
Sbjct: 601 QLVEQGKQQAFTIRVPERPKCP 622