Pairwise Alignments

Query, 374 a.a., tRNA-specific 2-thiouridylase MnmA from Pseudomonas putida KT2440

Subject, 373 a.a., tRNA 2-thiouridine(34) synthase MnmA from Magnetospirillum magneticum AMB-1

 Score =  237 bits (604), Expect = 4e-67
 Identities = 151/372 (40%), Positives = 207/372 (55%), Gaps = 26/372 (6%)

Query: 7   KDPAKTRVIVGMSGGVDSSVSALLLIEQGYQVEGLFMKNWE-EDDGTE-------YCTAR 58
           K P+ TRV+V MSGGVDSS  A LL EQGY V G+ ++ ++    G E        C A 
Sbjct: 8   KPPSSTRVVVAMSGGVDSSAVAALLKEQGYDVVGVTLQLYDLATSGIEPGACRPNTCCAG 67

Query: 59  EDLADAQAVCDRIGIKLHTANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNREIKFKAFL 118
           +D+ DA+AV D +GI  +  +F   +  +V E F + Y   RTP P I CNR +KF+  L
Sbjct: 68  KDIHDARAVADALGIPHYVLDFEETFRRDVVERFAQTYLEARTPVPCIECNRTVKFRDLL 127

Query: 119 DYALSLGADLIATGHYVRRRDTGALTELLKGLDPNKDQSYFLHAVGGQEIARTLFPVGEL 178
             A  LG D +ATGHYVRRR      EL  G DP +DQSYFL A    ++    FP+G++
Sbjct: 128 GVAKDLGGDALATGHYVRRRPGVDGPELWTGRDPGRDQSYFLFATTRDQLDFLRFPLGDM 187

Query: 179 E-KPEVRAIAEKHGLATAKKKDSTGICFIGERRFSDFLKQYLP--AQPGDIETTEGEVIG 235
             K E RAIA +H L  A K+DS  ICF+ +  ++  + +  P  A+PG+I  T G+V+G
Sbjct: 188 AGKEETRAIAARHHLPVAAKRDSQDICFVPDGDYAALVTRLHPDAARPGEIVDTAGKVLG 247

Query: 236 RHHGLMYHTIGQRQGLGIGGLKDASDEPWYVLHKDLARNVLVVGQGNEHPWLFSRALLAS 295
           RH GL+++TIGQR+GLG+GG       P YV+  +     +VVG   +   L    +   
Sbjct: 248 RHGGLIHYTIGQRRGLGLGG-----GPPLYVVALEPETGRVVVGSRED---LNCLTIQVE 299

Query: 296 EIFWVNPVDLGSPRQLTAKVRYRQSDQRC-TLERTASGYRA--VFDEPQRAVTPGQSVVF 352
            + W+     G   +L   V+ R +      L R  SG RA  + D P++ V PGQ+ VF
Sbjct: 300 AVNWLG----GDETELRVAVKVRSTRPAAPALLRRLSGDRAQVILDHPEQGVAPGQACVF 355

Query: 353 YDGEVCLGGGVI 364
           Y GE  LGGG I
Sbjct: 356 YQGERVLGGGWI 367