Pairwise Alignments

Query, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

Subject, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

 Score =  797 bits (2059), Expect = 0.0
 Identities = 393/440 (89%), Positives = 423/440 (96%)

Query: 1   MDLFRSEPVAQPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGK 60
           MDLFRS+P+AQPLAARLR ++LDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGK
Sbjct: 1   MDLFRSDPIAQPLAARLRSTNLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGK 60

Query: 61  TTLARLLAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQ 120
           TTLARLLA+  DAHFETVSAVLAGVKEIRQAVEVAKQQAGQYG+RTILFVDEVHRFNKSQ
Sbjct: 61  TTLARLLAKVSDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGKRTILFVDEVHRFNKSQ 120

Query: 121 QDAFLPYVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTEER 180
           QDAFLPYVEDGTL+FIGATTENPSFELNNALLSRARVYVLKSLDEAA++KL+ RAL+E++
Sbjct: 121 QDAFLPYVEDGTLIFIGATTENPSFELNNALLSRARVYVLKSLDEAAMQKLLQRALSEDK 180

Query: 181 GLGKRNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSEIDVEMLQSLLGDSRRR 240
           GLGKR LRV ++ FK+L+ AADGDGRR LN +ENASDLAEDGSEI V++LQSLLGD+RRR
Sbjct: 181 GLGKRQLRVSEEGFKILLTAADGDGRRFLNLVENASDLAEDGSEIGVDLLQSLLGDTRRR 240

Query: 241 FDKGGEAFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGNAD 300
           FDKGGEAFYDQISALHKSVRGSNPDGALYWFARM+DGGCDPLY+ARRVVRMASEDIGNAD
Sbjct: 241 FDKGGEAFYDQISALHKSVRGSNPDGALYWFARMIDGGCDPLYLARRVVRMASEDIGNAD 300

Query: 301 PRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGSLE 360
           PRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVY+GFK+ALR AAE+GSLE
Sbjct: 301 PRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYMGFKSALRAAAEYGSLE 360

Query: 361 VPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLELKI 420
           VP+HLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPD+LEP   YQPVPRGLELKI
Sbjct: 361 VPMHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDDLEPLPLYQPVPRGLELKI 420

Query: 421 GEKLRHLADLDRNSPRQRRK 440
           GEKL HLA+LDR SP+QRRK
Sbjct: 421 GEKLNHLAELDRLSPKQRRK 440