Pairwise Alignments

Query, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

Subject, 691 a.a., DNA polymerase III, gamma subunit from Pseudomonas putida KT2440

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 40/238 (16%)

Query: 11  QPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALH-SMIFWGPPGVGKTTLARLLAQ 69
           Q LA + RP S  E VGQ H+L   K L  AL+   LH + +F G  GVGKTT+AR++A+
Sbjct: 4   QVLARKWRPRSFREMVGQTHVL---KALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK 60

Query: 70  FCDAH-------------------------FETVSAVLAGVKEIRQAVEVAKQQAGQYGR 104
             +                            E  +A    V++ R+ ++   Q A   GR
Sbjct: 61  CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNV-QYAPSRGR 119

Query: 105 RTILFVDEVHRFNKSQQDAFLPYVEDGT--LLFIGATTENPSFELNNALLSRARVYVLKS 162
             +  +DEVH  +    +A L  +E+    + FI ATT+    +L   +LSR   + LK+
Sbjct: 120 FKVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQ--KLPATILSRCLQFSLKN 177

Query: 163 LDEAALRKLVNRALTEERGLGKRNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAE 220
           +    + + ++  L  E      N+   +DA  +L  AADG  R  ++  + A    E
Sbjct: 178 MSPERVVEHLSHVLAAE------NVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFGE 229