Pairwise Alignments

Query, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

Subject, 447 a.a., FIG065221: Holliday junction DNA helicase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  521 bits (1342), Expect = e-152
 Identities = 263/438 (60%), Positives = 330/438 (75%), Gaps = 6/438 (1%)

Query: 6   SEPVAQPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGKTTLAR 65
           S+   QPLAAR+RP +L +Y+GQ+HLLA GKPL  A+E G LHSMI WGPPG GKTTLA 
Sbjct: 9   SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68

Query: 66  LLAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQQDAFL 125
           ++A++  A  E +SAV +GVKEIR+A+E A+Q     GRRTILFVDEVHRFNKSQQDAFL
Sbjct: 69  VIARYASADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFL 127

Query: 126 PYVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTEE-RGLGK 184
           P++EDGT+ FIGATTENPSFELN+ALLSRARVY+LKSL    + +++++A+ ++ RG G 
Sbjct: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTTDDIEQVLDQAMQDKTRGYGD 187

Query: 185 RNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSEIDVEMLQSLL----GDSRRR 240
           +++ + D+  + +    +GD RR LN LE  +D+AE        +L +LL    G+   R
Sbjct: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEADDSGKRVLLPALLTEIAGERSAR 247

Query: 241 FDKGGEAFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGNAD 300
           FD  G+ FYD ISALHKSVRGS PD ALYW+AR++  G DPLY+ARR + +ASED+GNAD
Sbjct: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307

Query: 301 PRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGSLE 360
           PRA+ + +AAWD   R+G  EGE A+AQAI YLACAPKSNAVY  FK AL +A E    +
Sbjct: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367

Query: 361 VPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLELKI 420
           VP+HLRNAPTKLMK++GYG EYRYAHDEP+AYAAGE YFP E+   +YY P  RGLE KI
Sbjct: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEVYFPPEIAQTRYYHPTNRGLEGKI 427

Query: 421 GEKLRHLADLDRNSPRQR 438
           GEKL  LA+ D+NSP +R
Sbjct: 428 GEKLAWLAEQDQNSPTKR 445