Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 525 a.a., transposase from Pseudomonas simiae WCS417

 Score =  306 bits (785), Expect = 9e-88
 Identities = 181/501 (36%), Positives = 283/501 (56%), Gaps = 12/501 (2%)

Query: 6   ENLPDDPVLLKQLLEQMIHERASDKSKIVHLEEEVALLRQRLFGRKTEQTGDAATPQLP- 64
           E L      L + +E M  +   D++ I  L  E+A L++  F +++EQ   A    L  
Sbjct: 27  ETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHEIAQLKRFKFAKRSEQHSPAQAGLLDD 86

Query: 65  LFD-EAESLAEPLDEADDEEVVAPTKRRGKRKPLPADLPRIEVVHELPEHELTCACGCRK 123
           L D +  ++   L+    +     TK++ KR  LP   PR  + HE P++   CACGC  
Sbjct: 87  LIDTDIAAIEAELEALQAKPASIETKQKPKRTALPPQFPRTLIHHE-PDNT-QCACGCAL 144

Query: 124 HAIGEEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVTADKPAQMIEKSMASPSVLAML 183
             IGE+VSE+L+  P    V +H+R  + C DCE+  + A  PAQ+I+K + +  +LA +
Sbjct: 145 KRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL-IQAPVPAQIIDKGIPTAGLLAQV 203

Query: 184 LTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCSEHFQPLLNLMRESLLKSRIIHC 243
           +  KY D LPL+R E++ GR G+ IPR TLA+WV  C    QPL++ +R  +L   ++H 
Sbjct: 204 MIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVHA 263

Query: 244 DETRVQVLKEPGREPSSQSWMWVQTGGP-PDRPVILFDYATSRAQEVPVRLLDGYRGYVM 302
           DET VQVL  PG + + ++++W        D   +++D+  SRA E   R L  ++G ++
Sbjct: 264 DETPVQVLM-PGAKKTHRAYVWAYASSAFADIKAVVYDFTPSRAGEHARRFLQDWKGKLV 322

Query: 303 TDDYAGYNALAAQDGLERLGCWAHARRKFVEAQKVQPKGKTGRADIALNLINKLYGVERD 362
            DD+ GY A  +  G+  +GC AHARRKF E   +    K+  A+ AL  I  LY +ER+
Sbjct: 323 CDDFGGYKASFSL-GVTEIGCMAHARRKFFE---LHATNKSQLAEQALRYIQVLYEIERE 378

Query: 363 LKDSDDEDRKVARMERSLPLLTQLKNWVEKTQPQVTTQNALGKAIGYLASNWSKLERYVE 422
           ++D + + R+  R E++ P +  L  W+   + ++    A+ KA  Y    W+ L RY++
Sbjct: 379 VRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIAKAFDYSLKRWTALSRYLD 438

Query: 423 HGYLPMDNNAAERAIRPFVIGRKNWLFSDTPRGATASAQLYSLVETAKANGQEPYAWLRH 482
            G +P+DNN AE+ IRP+ +GRKNWL++ + R    +A L SL+++AK NG +PYA+L+ 
Sbjct: 439 DGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMSLIQSAKLNGHDPYAYLKD 498

Query: 483 ALERLPQAASVEDYEALLPWN 503
              RLP   + E  E LLP N
Sbjct: 499 VFTRLPTQRASEIAE-LLPHN 518