Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 583 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  233 bits (595), Expect = 1e-65
 Identities = 167/525 (31%), Positives = 266/525 (50%), Gaps = 52/525 (9%)

Query: 18  LLEQMIHERASDKSKIVHLEEEVALLRQRLFGRKTEQTGDAATPQLPLFDEA-----ESL 72
           LL++   E A  ++KI  +  E+A L++  FG K+E        Q  LF+E        L
Sbjct: 69  LLQRKDREIALREAKIEKITFELARLKRWKFGAKSEAMN---AEQRRLFEETLAEDEAGL 125

Query: 73  AEPLDE-------------ADDEEVVAPTKRRGKRKPLPADLPRIEVVHELPEHE--LTC 117
            E L+              A D    AP+ RR +R P P  L R+E  HE PE    L  
Sbjct: 126 REQLERLRREAAAAAAAAAASDTTTKAPS-RRPRRNPFPDHLRRVEHHHE-PERTDCLEP 183

Query: 118 ACGCRKHAIGEEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVTADKPAQMIEKSMASP 177
            CG     IG+EVSE+L+IVP +  V +H+   + CR C+     A   A++IE  +A+ 
Sbjct: 184 GCGRPMTRIGQEVSERLDIVPAEFFVHRHIYGKWACRCCQVLR-QAPSVAEVIEGGIAAS 242

Query: 178 SVLAMLLTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCSEHFQPLLNLMRESLLK 237
             +A  L +++VD +P +R   +  R G+  PR TLA    Q     QPL    R  +L 
Sbjct: 243 GFVAHTLISRFVDHMPYYRQTTINARSGVHTPRSTLASITGQAGAALQPLHEAHRRFILS 302

Query: 238 SRIIHCDETRVQVLKEPGREPSSQSWMWVQTGGPPDR-PVILFDYATSRAQEVPVRLLDG 296
             ++H DET V +L +PG   + ++++W       D+ P +++++   R  + P+  L G
Sbjct: 303 CAVLHADETPVSLL-DPGAGKTRRAYVWAYARSWHDKVPGVIYEFCPGRGAQYPLAFLGG 361

Query: 297 -------YRGYVMTDDYAGYNALAAQDGL-ERLG--CWAHARRKFVEAQKVQPKGKTGRA 346
                  + G +++D Y+ Y  +       +RLG  C AHARR F E          G +
Sbjct: 362 RERHGRRWSGTLLSDRYSAYETVVDPRLYPDRLGAACAAHARRNFEELTH------DGTS 415

Query: 347 DIALNLINK---LYGVERDLKDSDDEDRKVARMERSLPLLTQLKNWVEKTQPQVTTQNAL 403
            + L  + +   +YGVE  L+D  D+DR+  R + + PL  +LK+W++  +  V      
Sbjct: 416 VVGLEAVRRFARIYGVEAQLQDLSDDDRRAQRQQLARPLWEELKHWLQLERRLVADGGPT 475

Query: 404 GKAIGYLASNWSKLERYVEHGYLPMDNNAAERAIRPFVIGRKNWLFSDTPRGATASAQLY 463
            KAI Y   +W+ L R++  G + +DNN  ER I+P+ +GR+ W+F  +      +A + 
Sbjct: 476 AKAIDYTLGHWTALTRHLNDGAVAIDNNHLERQIKPWAMGRRAWMFVGSELAGQRAAIVM 535

Query: 464 SLVETAKANGQEPYAWLRHALERLP--QAASVEDYEALLPWNCKP 506
           SLV++A+ NG +P+A+LR  L+RLP  +A+ +ED   LLP   +P
Sbjct: 536 SLVQSARLNGHDPWAYLRDVLQRLPTQRASQIED---LLPHRWQP 577