Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 524 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  332 bits (851), Expect = 2e-95
 Identities = 213/524 (40%), Positives = 295/524 (56%), Gaps = 27/524 (5%)

Query: 1   MISMPENLPDDPVLLKQLLEQMIHERAS--DKSKIVHLEEEVALLRQR-----LFGRKTE 53
           M+ MP    ++   L+Q L +      S   + ++V  E ++AL R R     LF  K+E
Sbjct: 1   MVQMPT--AEEFAALQQALAEATRRSESLVGELRVVTTERDLALERLRALQGQLFAAKSE 58

Query: 54  QTGDAATPQLPLF-DEAESLAEPLD----EADDEE---VVAPTKRRGKRKPLPADLPRIE 105
             G   + Q  LF +EAE+LA        E+DDEE   V    +++  RKPL   LPR  
Sbjct: 59  ARG---SEQKDLFLNEAEALAPTAQTLPAESDDEESTTVAGHQRKKRGRKPLDPALPRDI 115

Query: 106 VVHELPEHELTCAC-GCRKHAIGEEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVTAD 164
           V HELPE E  CA  G     IG EVSEQ+ ++P Q+RV++H R  Y C  C+ +   A 
Sbjct: 116 VRHELPESERVCAHDGHALVEIGAEVSEQMHVIPEQVRVLQHHRIKYACPCCDLSLKVAP 175

Query: 165 KPAQMIEKSMASPSVLAMLLTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCSEHF 224
            PA++I + + +    A ++T KY  G+PL+R   +L R G +I   TLA  V++     
Sbjct: 176 TPARIIPRGLLTEEAQAWVITGKYQFGMPLYRTAVLLRRFGGNIVSNTLAAGVVRIGLAV 235

Query: 225 QPLLNLMRESLLKSRIIHCDETRVQVLKEPGREPSSQSWMWVQTGGPPDRPVILFDYATS 284
           QP++NL+R+ LL S +I+ DET VQVLKEPGR+  ++S+MW Q  G    PV LF YA  
Sbjct: 236 QPVINLLRDHLLDSDLIYGDETTVQVLKEPGRKAQTKSYMWAQMNGSGP-PVRLFAYAPG 294

Query: 285 RAQEVPVRLLDGYR--GYVMTDDYAGYNALAAQDGLERLGCWAHARRKFVEAQKVQPKGK 342
           R      +L  G R     ++D Y  Y+ +AA  GL  LGCW HARR FV+A++  PK  
Sbjct: 295 RGAMHADKLYAGIRRGATFVSDGYQVYDGIAAGHGLTHLGCWVHARRPFVKAEEAIPKAA 354

Query: 343 TGRADIA---LNLINKLYGVERDLKDSDDEDRKVARMERSLPLLTQLKNWVEKTQPQVTT 399
                +A   + LI KLY  E   +    + R   R   S  +++ ++  +      V  
Sbjct: 355 RSPDQLATRFIKLIGKLYRAEARAEKWTPQRRGRLRKRYSASVVSNIEQLLLTNLHAVAP 414

Query: 400 QNALGKAIGYLASNWSKLERYVEHGYLPMDNNAAERAIRPFVIGRKNWLFSDTPRGATAS 459
            + LG+A+ YL   W KL R++E G  P+D+N  E AIRPFV+GRK WLF+DT  GA AS
Sbjct: 415 TSLLGEALHYLHGQWPKLIRFLESGSWPLDSNPVENAIRPFVVGRKGWLFADTVGGANAS 474

Query: 460 AQLYSLVETAKANGQEPYAWLRHALERLPQAASVEDYEALLPWN 503
           A LYSL+ETAKANG EPY +L    ++LP A + +DYEALLPWN
Sbjct: 475 ANLYSLIETAKANGIEPYRYLVALFKKLPLAQTADDYEALLPWN 518