Pairwise Alignments

Query, 328 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 297 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  109 bits (273), Expect = 7e-29
 Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 11/288 (3%)

Query: 33  SWDDLRIIKTLSDCSNRAATAKKLGINVSTVSRRVAQVEKTLGVALFDHRKAGYLLTAEG 92
           +W+DL     L+        A++L ++ +TVSRR++++EK L + LFD +  G++LT  G
Sbjct: 3   NWNDLIFFLELARQGRLMPAARRLKVDHTTVSRRISELEKDLSLKLFDRKPDGFVLTEPG 62

Query: 93  VELRALAERVELDIVSVTRRVSRAGQGPLGKLRITTSDSLLLYFLTPIIADFKALNEGIT 152
             L A+AER+E + V V   +  A   P G +R+ + + +  ++L    A+      G+ 
Sbjct: 63  HRLFAVAERIEQEAVGVEETLQAAPSAPRGHVRVASMEGIGAFYLAERFAELAGKEPGLV 122

Query: 153 IEVLVGNQTLSLARDESDIAVRATKKPTDTLVGRKLANIAWAAYGS---VKQAAITDPFA 209
           +E++     ++L + E+DI++         L  R+L     A Y +   V++  +    A
Sbjct: 123 VELVTERHLINLTKREADISISFVPPQGQRLAVRRLGAFRLALYAAPDYVRRFGMPRTRA 182

Query: 210 E--GQAWVSYSGGLCGLKATSYVECRVPSELISYRTDSVAAASAAIAAGLGFGFLPCMLG 267
           E     +V Y   L  ++   ++   +    +S+R+ S+ A   A+A G G G LP    
Sbjct: 183 ELPSHTFVDYVEDLVAIQPVHWLLDVLEPLKVSFRSTSMHAQQNAVARGAGIGLLPLFSA 242

Query: 268 DITPGLVRAGPVVQE---LQDELWLLTHQDIRKSWRVKAFMTFCAAAV 312
              P L+   P++ +   +  ++++  H+D+    R +A +   A  V
Sbjct: 243 KSNPRLI---PILTDEVVVMRDIYVSVHEDLEFMGRFRAVLQHLAEVV 287