Pairwise Alignments

Query, 328 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 349 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  114 bits (286), Expect = 3e-30
 Identities = 87/288 (30%), Positives = 124/288 (43%), Gaps = 10/288 (3%)

Query: 34  WDDLRIIKTLSDCSNRAATAKKLGINVSTVSRRVAQVEKTLGVALFDHRKAGYLLTAEGV 93
           W DL     ++        A +L +  STVSRR+A +E  LG  LFD R  GY LTA G 
Sbjct: 51  WSDLTFFLAVARAGRLTVAAARLKVEHSTVSRRIAALEAALGAKLFDRRPHGYALTAAGD 110

Query: 94  ELRALAERVELDIVSVTRRVSRAGQGPLGKLRITTSDSLLLYFLTPIIADFKALNEGITI 153
            L A AE +E   +S    ++ +  G  G +RI   D    +FL P I     L+  + I
Sbjct: 111 RLLAAAEGMETLALSAQGEIAGSDLGVSGTVRIGAPDGFGTFFLAPRIGALSDLHPELDI 170

Query: 154 EVLVGNQTLSLARDESDIAVRATKKPTDTLVGRKLANIAWAAYGS----VKQAAITDPFA 209
           ++L   +  SL++ E+DIA+  ++     L  RKL +     Y +     K  AI    A
Sbjct: 171 QLLAMPRLFSLSKREADIAISLSRPKEGRLHARKLTDYRLGLYAARAYLEKHGAIESRAA 230

Query: 210 -EGQAWVSYSGGLCGLKATSYVECRVPSELISYRTDSVAAASAAIAAGLGFGFLPCMLGD 268
            +   ++ Y   L       YV        +  ++ S+ A   A  AG G   LP  + D
Sbjct: 231 LQRHRFIGYVDDLIYAPELDYVPLVAKDLRVRLKSSSLVAQMTATRAGAGVCVLPRFMAD 290

Query: 269 I-----TPGLVRAGPVVQELQDELWLLTHQDIRKSWRVKAFMTFCAAA 311
           +       GLV   P    L    WLLTH D R   R++    F A A
Sbjct: 291 LFAGEGPEGLVPILPTEVGLTRTFWLLTHTDTRDLARIRVAADFIAEA 338