Pairwise Alignments

Query, 328 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 315 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  106 bits (264), Expect = 9e-28
 Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 12/304 (3%)

Query: 28  AVSQLSWDDLRIIKTLSDCSNRAATAKKLGINVSTVSRRVAQVEKTLGVALFDH-RKAGY 86
           ++  L+WDDL+    ++     +  AK+L ++ +TVSRR++ +E +LG  LF+  R  G+
Sbjct: 7   SLGSLNWDDLKFFLEVARTRKASVAAKRLAVDYTTVSRRISSLEVSLGTLLFEKSRTNGF 66

Query: 87  LLTAEGVELRALAERVELDIVSVTRRVSRAGQGPLGKLRITTSDSLLLYFLTPIIADFKA 146
           +LT EG  L   AE +E  +     +VS +G    G +R+  ++    +F+TP ++ F  
Sbjct: 67  VLTTEGQRLLGYAESIESTLHMACEQVSGSGVALSGHVRMGCTEGFGSFFVTPQLSHFVD 126

Query: 147 LNEGITIEVLVGNQTLSLARDESDIAVRATKKPTDTLVGRKLANIAWAAYGSVKQAAITD 206
               I++++L     +SL++ E+DI +   +      V  KL +     Y +        
Sbjct: 127 TYPAISVDILPLPHFISLSKREADIVIALERPEHGPYVCCKLCDYKLQLYATQDYLDQHP 186

Query: 207 PFAE-----GQAWVSYSGGLCGLKATSYVECRVPSELISYRTDSVAAASAAIAAGLGFGF 261
           P  +        ++SY   L       Y+   VP    S R+ SV A   A   G     
Sbjct: 187 PIRKPADLAEHPFISYVDDLAFSSELLYLANVVPGASASLRSTSVIAQYVAAQQGRSMAI 246

Query: 262 LPCMLGDITPGLVRAGPVVQE---LQDELWLLTHQDIRKSWRVKAFMTFCAAAVADLKPL 318
           LPC L    P L+   PV+ E   +  + W+   +D+RK  R+     +        + L
Sbjct: 247 LPCFLAAQDPRLL---PVLGEQITITRQFWMYCREDLRKLKRITLLWDYIREVTEQNQGL 303

Query: 319 VEGQ 322
           + G+
Sbjct: 304 LMGE 307