Pairwise Alignments

Query, 328 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 295 a.a., transcriptional regulator from Pseudomonas putida KT2440

 Score =  117 bits (294), Expect = 3e-31
 Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 15/293 (5%)

Query: 34  WDDLRIIKTLSDCSNRAATAKKLGINVSTVSRRVAQVEKTLGVALFDHRKAGYLLTAEGV 93
           W+DLR    L         AK+L    STV+R +  +E++LG ALF     GY LT  G 
Sbjct: 4   WNDLRFFLELQRSGRLLTAAKRLNTTHSTVARHIESIEQSLGTALFVQHAQGYELTPSGQ 63

Query: 94  ELRALAERVELDIVSVTRRVSRAGQGPLGKLRITTSDSLLLYFLTPIIADFKALNEGITI 153
            L   AE +E   +     +++A   PLGK+R+  ++ + + F TP +        G+ +
Sbjct: 64  ALLKHAEAMENVALLAQEEITQA-ITPLGKIRLGVTEGIGIMFFTPRMNALFERYPGLEV 122

Query: 154 EVLVGNQTLSLARDESDIAVRATKKPTDTLVGRKLANIAWAAYGSVKQAAITDPFAEGQ- 212
           E++   + +S+   E++I++   +   D L+ RKL +   A Y S        P    + 
Sbjct: 123 ELVAVPRFVSILNREAEISIHLERPNADLLITRKLTDYRLALYASQAYLDRAPPLRHRED 182

Query: 213 ----AWVSYSGGLCGLKATSYVE--CRVPSELISYRTDSVAAASAAIAAGLGFGFLPCML 266
               +W+ Y   L   +   ++   CRVP+  + +R+ SV A  AA  AGLG   LP  +
Sbjct: 183 LARHSWIGYVDDLLFSQELLFLNSFCRVPN--VVFRSTSVIAQQAAARAGLGIAVLPNYM 240

Query: 267 GDITPGLVRAGPVVQELQDELWLLTHQDIRKSWRVKA----FMTFCAAAVADL 315
               P LVR  P  + +Q   W+ T +++ KS R++      +  CAA  ++L
Sbjct: 241 ARHDPTLVRVLP-GETIQRSYWICTRRELHKSVRLRVVWDYLLALCAAEQSEL 292