Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 709 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  784 bits (2025), Expect = 0.0
 Identities = 396/668 (59%), Positives = 505/668 (75%), Gaps = 13/668 (1%)

Query: 15  WPAALFAVALVFSVFQIATAAFPLISTQVLRAIHVGFLLLVVYLSYSFVGHRRPWQPLA- 73
           W  A+F +A+ FS FQ+ TAA+  +++Q++R++HVGFLLLVV+   +   H+   + L  
Sbjct: 43  WGRAVFWIAVAFSTFQVITAAWSPLASQIVRSVHVGFLLLVVFAIAA--NHKTGTERLVL 100

Query: 74  WLLGLAGMATAAYQWYFEGDLIQRSGELTTSDLIVGLLLIGLVFEAARRVMGIALPIICA 133
           W LG+       Y W F   LIQR+G+ +T D++VG + + LVFE +RR+MG ALPI+C 
Sbjct: 101 WGLGIFSFVVGLYHWVFYAALIQRAGDPSTMDIVVGTIAVALVFEGSRRLMGAALPIMCG 160

Query: 134 LFLAYGLLGQHLPGELAHRGYGLDQIVNQLAFGTEGLYGTPTYVSATYIYLFILFGAFLE 193
            F+ YGL G++LP  L HR +   Q+V+Q+  GTEG+YGTPTYVS+++I+LFILFGAFLE
Sbjct: 161 GFILYGLFGEYLPAPLDHRPFDYVQVVDQMFLGTEGIYGTPTYVSSSFIFLFILFGAFLE 220

Query: 194 QAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTTGQFTIPLMKRFG 253
           +AGMI+LF D AMG  GH  GGPAKV+V SSALMGTI GSGVANVVTTGQFTIPLMKRFG
Sbjct: 221 RAGMIQLFNDLAMGTVGHAKGGPAKVAVISSALMGTINGSGVANVVTTGQFTIPLMKRFG 280

Query: 254 YKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAALIPALLYFGSVYWM 313
           YKPAFAG VEAT+SMG Q+MPPVMGAVAFIMAETI+VPYA +A AA+IPA LYF +V+ M
Sbjct: 281 YKPAFAGAVEATASMGGQIMPPVMGAVAFIMAETIDVPYATIATAAVIPAFLYFFTVFAM 340

Query: 314 VHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPLMVLVALLFSGRTPLYSGMVGLALTA 373
           VHLEA +  L GLP+++CP+AW ALR  W+L++PL  LV LLFSG TPL++G VGLALTA
Sbjct: 341 VHLEAGKDGLSGLPKDKCPNAWLALRNNWYLILPLAALVWLLFSGYTPLFAGTVGLALTA 400

Query: 374 IVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILMVIAGLAIACCFVQGGRAT 433
           +++LG+ +        LR  FW+ LG+  + F   GI  +  VIA L     FV+GGR T
Sbjct: 401 LIVLGAPVARLIGPYGLRVVFWIVLGLSAASFVEYGINGVATVIAVLVAILFFVKGGRET 460

Query: 434 LHACVMALAEGARHAVPVGIACALVGVIIGVISLTGLATTFAGYILDLGRDNLFLSLVLT 493
           L   + ++A+GAR+A+PVGIACALVG +IGV +LTG+ATTFA +++++G+++LFLSLVLT
Sbjct: 461 LRISIESMADGARNALPVGIACALVGTMIGVFTLTGVATTFATFVVEVGKNSLFLSLVLT 520

Query: 494 MLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGILADLTPPVALACF 553
           M+ CL+LGMG+PTIPNYIIT+SIA PALL LGVPLIVSHMFVFYFGI+ADLTPPVALA F
Sbjct: 521 MIACLILGMGLPTIPNYIITASIAGPALLALGVPLIVSHMFVFYFGIMADLTPPVALAAF 580

Query: 554 AAAPIAKEKGLLISFWAVRIALAGFVVPFMAVYDPALMMQ-GDSMGSTL-------YMVI 605
           AAAPIA   G  I + A RIA+AG+VVPFMAVY PALM+Q GD M   +       Y+ +
Sbjct: 581 AAAPIAGASGQTIGWIATRIAVAGYVVPFMAVYAPALMLQNGDPMADIIGFWPAVAYVFV 640

Query: 606 KAAFAVALWGCASIGHLRAPMPWWERLLAFAAGVSLILAAPISDEVGFALGAAVLGWHYW 665
           KA  A+ LW   + G+L AP+   ER++AF+A   LILA P++DEVGFA  AA +GWHYW
Sbjct: 641 KAIVAIILWAATATGYLLAPLNILERIIAFSAAALLILALPMTDEVGFAASAAFIGWHYW 700

Query: 666 --RTRPAS 671
             RTRP +
Sbjct: 701 KSRTRPVA 708