Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 426 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 101/417 (24%), Positives = 167/417 (40%), Gaps = 61/417 (14%)

Query: 182 IYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTT 241
           I  F+L GA + + GM R    FA  L G   GG + V++ +S   G I+GS VA+  + 
Sbjct: 58  IPFFVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASV 117

Query: 242 GQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAALI 301
           G   IP M+R GY   FA  V  + S+ + L PP   +V + +A   +V  A +  A ++
Sbjct: 118 GSVLIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVV 177

Query: 302 PALLYFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPLMVLVALLFSGRTP 361
           P L                                       L+   ++++ L+F+ +  
Sbjct: 178 PGL---------------------------------------LMSACLMVLCLIFAKKRN 198

Query: 362 LYSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILMVIAGLA 421
              G        ++ L  A+ + A   W   A  + LG + SG F       + V+    
Sbjct: 199 YPKG-------EVIPLKQALKICADALWGLMAMVIILGGILSGIFTATESAAIAVLWAFF 251

Query: 422 IACCFVQGGRATLHACVMALAEGARHAVPVGIA-CALVGVIIGVISLTGLATTFAGYILD 480
           +     +  + +    +M         V + IA  A  G I+ ++ +    TT     L 
Sbjct: 252 VTMFIYRDYKWSELPKLMHRTVRTISIVMILIAFAASFGYIMTLMQIPAKITTL---FLT 308

Query: 481 LGRDNLFLSLVLTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGI 540
           L  DN ++ L+      L+LG  +   P  +I + I  P +L +GV  +   M +     
Sbjct: 309 LS-DNRYVILMCINAMLLLLGTVMDMAPLILILTPILLPVVLGIGVDPVHFGMIMLVNLG 367

Query: 541 LADLTPPVALACFAAAPIAK---EKGL--LISFWAVRIALAGFVVPFMAVYDPALMM 592
           +  +TPPV    F  A + K   EK +  L+ F+ V      F+V     Y PAL +
Sbjct: 368 IGLITPPVGAVLFVGAAVGKVSIEKTVKALLPFYGVL-----FLVLMAVTYIPALSL 419