Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 105/441 (23%), Positives = 187/441 (42%), Gaps = 39/441 (8%)

Query: 128 LPIICALFLAYGLLGQHLPGELAHRGYGLDQIVNQLAFGTEG-------LYGTPTYVSAT 180
           + ++C   L +  +   +P  ++    GL   V+ L F  +        L+ T    +  
Sbjct: 1   MAVLCLFLLLFVFMFLGVPIAIS---LGLSGAVSILMFSQDSVSSLAIKLFETSDAYTFL 57

Query: 181 YIYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVT 240
            I  F+L GAF+   G+ +   DFA    GH  GG A  +V +  L   ++GS  A V  
Sbjct: 58  AIPFFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAA 117

Query: 241 TGQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAAL 300
            G   +  M R GY  AF  G+   +     L+PP +  V +  A   +V   ++  A +
Sbjct: 118 VGSIAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSV--GKLFMAGV 175

Query: 301 IPALLYFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPLMVLVALLFSGR- 359
           IP LL    +   +++ AR   L   PR        + R+ ++ L+ L++++  ++SG  
Sbjct: 176 IPGLLLGLMLMIAIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMF 235

Query: 360 TPLYSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILMVIAG 419
           TP  +  V    +A V L    I +  +  LR    V   +L SG  R+ I +++ +IA 
Sbjct: 236 TPTEAAAVAAVYSAFVAL---FIYKDMQ--LRDCPKV---LLESG--RLAI-MLMFIIAN 284

Query: 420 LAIACCFVQGGRATLHACVMALAEGARHAVPVGIACALVGVIIGVIS--------LTGLA 471
             +    +   +         L+EG     P+G    +V V++ +          +  LA
Sbjct: 285 AMLFAHVLTTEQIPQEITAWVLSEG---LTPIGF-LIMVNVVLLIAGSFMEPSAIVLILA 340

Query: 472 TTFAGYILDLGRDNLFLSLVLTMLTCLVLGMGIPTIP-NYIITSSIAAPALLELGVPLIV 530
             F    + LG D + L +V  M+  + +G+  P +  N  +TS++    L +     + 
Sbjct: 341 PIFFPIAMKLGIDPIHLGIV--MVVNMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALP 398

Query: 531 SHMFVFYFGILADLTPPVALA 551
             M +  F I+    P ++LA
Sbjct: 399 WLMILLVFLIMVTYLPFISLA 419