Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 433 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Variovorax sp. SCN45

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 95/405 (23%), Positives = 153/405 (37%), Gaps = 66/405 (16%)

Query: 182 IYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTT 241
           I +F+L GA +  +G+ R     A  + GH  GG    +V +      I GS VA   T 
Sbjct: 65  IPMFMLMGALVSVSGVSRELFKAANSMIGHLRGGLGVATVVACGGFAAICGSSVATAATF 124

Query: 242 GQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPP--VMGAVAFIMAETINVPYAEVAKAA 299
                P M+RF Y  +F+ GV A       ++PP  V+   A +  + I     ++  A 
Sbjct: 125 SAVAYPEMRRFNYPQSFSTGVIAAGGTLGAILPPSTVLAVYAILTQQDIG----KLFMAG 180

Query: 300 LIPALLYFGSVYWM---VHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPLMVLVALLF 356
           ++P +L   ++Y M   + ++ R   L G   +        L+  W  LV  + ++  L+
Sbjct: 181 IVPGILAM-AMYVMTIAIIVKLRPDWLPGGEIKPWSERVKDLKNVWAPLVLFVFVIGGLY 239

Query: 357 SGR-TPLYSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILM 415
            G  TP  +G VG                                  SG F +G+  +  
Sbjct: 240 GGFFTPTEAGGVG---------------------------------ASGAFILGL--VRR 264

Query: 416 VIAGLAIACCFVQGGRATLHACVMALAEGARHAVPVGIACALVGVIIGVISLTGLATTFA 475
            + G  I    +   R    A V  +  GA           L G  + +       T F 
Sbjct: 265 KLDGPKIREALLSATRTA--AAVFTVLIGA----------LLFGYFLTITQSPQKLTEFL 312

Query: 476 GYILDLGRDNLFLSLVLTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFV 535
              L +GR  +   L L ML  LVLG  +  +   I+T  I  P ++ LG   I   + +
Sbjct: 313 TG-LGIGRYGV---LALIMLMYLVLGCLMDAMAMIILTVPIIYPVIVHLGFDPIWFGVII 368

Query: 536 FYFGILADLTPPVALACFAAAPIAKEKGLLISFWAVRIALAGFVV 580
                L  + PPV +  F    + K+    +SF  +   +  F+V
Sbjct: 369 VMTVELGLIHPPVGMNVFVIKSVVKD----VSFTTIFKGVLPFIV 409