Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 629 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

 Score = 68.9 bits (167), Expect = 7e-16
 Identities = 85/407 (20%), Positives = 153/407 (37%), Gaps = 68/407 (16%)

Query: 184 LFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTTGQ 243
           LFI  GA +E  GM R    F   L GH  GG + V + +  L+  I+GS +A++     
Sbjct: 267 LFIFLGALIEMTGMARAMIQFLASLLGHVRGGLSYVLIGAMYLVSGISGSKIADMAAIAP 326

Query: 244 FTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAALIPA 303
              P M + G KP     + + +   ++ +PP    V   +     V  A +    L+PA
Sbjct: 327 VLFPEMTKRGAKPGDLVALLSATGAQTETIPP--SIVLITIGSVTGVSIAALFTGGLLPA 384

Query: 304 LLYFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRW-FLLVPLMVLVALLFSGRTPL 362
           ++   ++  +V    RR  L G+ R         L      +L+P ++  A++    T  
Sbjct: 385 VVLGAALCAVVWWRYRREDLSGVQRYSKREIGKLLLVALPAVLLPFVIRAAVVEGVATAT 444

Query: 363 YSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILMVIAGLAI 422
               +G+   A+V     +++  Q  W R                  +  +L+  A L+ 
Sbjct: 445 EVSTIGIVYAAVV----GLVVYRQFDWRR------------------LKPMLVDTASLSG 482

Query: 423 ACCFVQGGRATLHACVMALAEGARHAVPVGIACALVGVIIGVISLTGLATTFAGYILDLG 482
           A  F+ G       C  A+A G                            T +G+  DL 
Sbjct: 483 AIIFIVG-------CATAMAWG---------------------------LTQSGFSQDLA 508

Query: 483 R------DNLFLSLVLTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVF 536
           R         +  L ++++  +VLG  +  IP  ++   +  P     GV  +   M V 
Sbjct: 509 RVMGTLPGGAYGFLAVSIVAFIVLGSVLEGIPAIVLFGPLLFPIAKAAGVHEVHYAMVVI 568

Query: 537 YFGILADLTPPVALACFAAAPIAK---EKGLLISFWAVRIALAGFVV 580
           +   +    PP  +  + A  ++K   ++G+   +  +   L G V+
Sbjct: 569 FSMGIGLFAPPFGVGYYGACAVSKVNPDEGIRHIWGYIGAMLVGLVI 615