Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 632 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score = 62.0 bits (149), Expect = 8e-14
 Identities = 83/406 (20%), Positives = 160/406 (39%), Gaps = 59/406 (14%)

Query: 157 DQIVNQLAFGTEGLYGTPTYVSATYIYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGP 216
           D  +  L +  + + GT  YV    I  F+L G  +E  GM     +  + +FG   GG 
Sbjct: 240 DPSLPMLVYSQQVMAGTDHYVLLA-IPFFVLAGLLMEANGMSSRLIELLLRMFGRLRGGL 298

Query: 217 AKVSVFSSALMGTITGSGVANVVTTGQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPV 276
             +++ ++A    ++GS +A++   G   +P +++    P    G+ A +++ ++ +PP 
Sbjct: 299 GLITITATAFFSGVSGSKLADIAAVGGIIMPAVRKTKQDPNETAGLLACTAVMAETIPPC 358

Query: 277 MGAVAFIMAETINVPYAEVAKAALIPALLYFGSVYWMVHLEARRSHLHGLPREQCPSAWD 336
           +  +  IM    N+  A +  A L+PA++   S+  +                       
Sbjct: 359 INMI--IMGFVANISIAGLFMAGLVPAVVLAVSLAAVT---------------------- 394

Query: 337 ALRQRWFLLVPLMVLVALLFSGRTPLYSGMVGLALTAIVILGSAIILRAQKTWLRAAFWV 396
                  + V   +     F  RTP++  ++G AL A+V++  A+I +           V
Sbjct: 395 -------IYVGTKINPDEAFDVRTPMFR-LLGGALVALVMV--AMIGKG----------V 434

Query: 397 ALGILCSGFFRMGIGVILMVIAGLAIACCFVQGGRATLHACVMALAEGARHAVPVGIACA 456
             G+  S        +  +V+  LA           T+ +        A  A  +    A
Sbjct: 435 TSGVATSTEVSSFAVIYALVVGWLAFR-------ELTVKSVARLFVRSASMAGGILFIVA 487

Query: 457 LVGVIIGVISLTGLATTFAGYILDLGRD-NLFLSLVLTMLTCLVLGMGIPTIPNYIITSS 515
               +   +++  +    + +++         + ++L++L  +V G  +   P  II   
Sbjct: 488 AASSLSFALTIQQIPQYLSEFMIGFAHSYGSTMFVMLSVLIMIVFGAILEGAPALIIFGP 547

Query: 516 IAAPALLELGV-PLIVSHMFVFY--FGILADLTPPVALACFAAAPI 558
           +  P   +LGV PL    + V    FG+ A   PPV L  FA   I
Sbjct: 548 LLTPIASQLGVNPLHFGTVMVIAMGFGLFA---PPVGLGLFATCAI 590