Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 427 a.a., C4-dicarboxylate ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 106/421 (25%), Positives = 177/421 (42%), Gaps = 75/421 (17%)

Query: 182 IYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTT 241
           I  FIL G FL   G+ R   +FA  + GH  GG     V + AL   ++GS  A VV  
Sbjct: 59  IPFFILAGNFLTHGGVARRMINFATAMVGHWYGGLGLAGVMACALFAAVSGSSPATVVAI 118

Query: 242 GQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAALI 301
           G   +P M + G+   F  GV  TS     L+PP +  V + +A   N     +  A +I
Sbjct: 119 GSIILPAMVKQGFPNKFGAGVITTSGALGILIPPSLVMVMYAVA--TNTSVGALFMAGVI 176

Query: 302 PALL---YFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPLMVLVALLFSG 358
           P L+     G+V W +   A ++    LP       + A R+  + L  +++++  +++G
Sbjct: 177 PGLVLATVLGAVTWYI---AWKNDYPRLPPATWAQRFRAFREAIWGLALIVIVIGGIYTG 233

Query: 359 RTPLYSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILMVIA 418
              +++     A++A+                  AF +A+  +       G+G IL+  A
Sbjct: 234 ---VFTPTEAAAMSAVY-----------------AFLIAV-FVYKDMPLKGVGKILLSSA 272

Query: 419 GLAIACCFVQGGRATLHACVMALAEGARHAVPVGIACALVGVIIGVISLTGLATTFAGYI 478
            ++    ++    A L + V+     A   +P  IA  +VG  +GVI+            
Sbjct: 273 SMSAMLLYII-TNAVLFSFVL-----ANENIPHAIADWIVGKELGVIA------------ 314

Query: 479 LDLGRDNLFLSLVLTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYF 538
                   FL +V  +L  LV G  +      +I + I  P  ++LG+  I       +F
Sbjct: 315 --------FLLVVNVLL--LVAGNFMEPSSIVLIMAPILFPVAMKLGIDPI-------HF 357

Query: 539 GILADLT-------PPVALACFAAAPIAKE--KGLLISFWAVRIALAGFVVPFMAVYDPA 589
           GIL  +        PPV L  + A+ I K     L ++ W   +A+ GF++  +  Y P 
Sbjct: 358 GILIVVNMEVGMCHPPVGLNLYVASGITKMGITELTVAVWPWLLAMLGFLM--VVTYWPP 415

Query: 590 L 590
           L
Sbjct: 416 L 416