Pairwise Alignments

Query, 316 a.a., periplasmic binding subunit of unknown solute from Pseudomonas putida KT2440

Subject, 386 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  156 bits (394), Expect = 9e-43
 Identities = 111/324 (34%), Positives = 158/324 (48%), Gaps = 20/324 (6%)

Query: 9   LASTLFAVSAAAQAAPTFINILTGGTSGVYYPVGVGISQIYSH-------------GIEG 55
           LA  L    AAAQ    F  I TG TSG Y+P+G  I+   S+             GI G
Sbjct: 15  LAGGLLGGPAAAQDLRYF-RIGTGTTSGTYFPIGGLIANAISNPPGSRPCDKGGSCGIPG 73

Query: 56  SKTTVQATKASVENLNLLQAGRGELAFALGDSVADAWKGDAEAGFKTPLKKLRAIAGTYP 115
                QA+  SV+N+ +L+AG  E  FA  D    A+ G      K P  +LR++   Y 
Sbjct: 74  LIVVAQASNGSVDNVEMLRAGTVEAGFAQADVAYWAYSGTGSFTGKRPFTELRSLGMLYA 133

Query: 116 NYIQIVASKESGITSLSDLKGKRISVGAPKSGTELNARAIFKAAGLTYQDMGKVEYLPYA 175
             IQIV   +  I  ++DLKG+ IS+G   SGT + AR I  A GL+   +  + YL   
Sbjct: 134 EAIQIVVRSDGFIDRMADLKGRSISLGEEGSGTLVEARLILDAYGLSESTITPL-YLKPG 192

Query: 176 ESVELIKNRQLDATLQSSGLGQAAIRDLAATLPVVFVPIPAEVVTRI--GNNAYQPATIP 233
            + + +   +LD      G   AA+ D+AA +P+  VP+  E   R+      Y    IP
Sbjct: 193 TAADRLAKGELDGFFMVGGYPVAAVSDVAARVPIRLVPLDGEPADRLLRSQRFYIEQEIP 252

Query: 234 ANTYDGQSADVSTAAINNILVTRADIGDDLAYQMTKLIFENLPRLVTA--HAAAKDIQAE 291
           AN Y G SA+  T ++   L+TRAD   DL Y + + ++    R V A  H   ++    
Sbjct: 253 ANAYPG-SANTPTLSLGAELLTRADRDPDLIYGVVRALWHENTRRVLADGHPQGRNFDPA 311

Query: 292 NAAKNLPIPLHPGAARYFKEKNLL 315
            A  N+ +PLHPGA R+++E  LL
Sbjct: 312 RAVANVSVPLHPGAERFYREAGLL 335