Pairwise Alignments

Query, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

Subject, 227 a.a., HTH-type transcriptional repressor NicS from Xanthobacter sp. DMC5

 Score =  141 bits (356), Expect = 8e-39
 Identities = 79/202 (39%), Positives = 115/202 (56%)

Query: 11  QQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLEHI 70
           + AD+TR NIL+AA   F+ +G  G R++ ++  A +N RMIYYYFGSKE L+++VLE +
Sbjct: 25  RDADKTRLNILEAAEAEFAAKGLAGARVDVVAEEAGANKRMIYYYFGSKEDLYLAVLERV 84

Query: 71  YASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGLHARKSQNL 130
           Y     AEA+L L+   P +A+  L  F +DY  +HP  + +L +ENL  G + R+S  L
Sbjct: 85  YTDMRIAEAELALEAMAPLEAITCLTEFKFDYPAQHPHLIPLLNSENLLGGEYLRRSLRL 144

Query: 131 RALSGEAVGVLRPIIEAGQAKGLFRDDICITHAYLMIASLCYFYNSNRHTLSSFLAVDLA 190
           R +    +  L  I+  G A G  R  I   H YL I+++ YFY SN  TLS+    DLA
Sbjct: 145 REMQISLIARLEAILARGAADGTLRAGIDPLHLYLTISAVSYFYFSNNPTLSTAFGRDLA 204

Query: 191 DKQAKADWLTFISDLALRGLRR 212
               +A     + D+  R + R
Sbjct: 205 TPDERAARRRHVVDVVTRYIER 226