Pairwise Alignments

Query, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

Subject, 219 a.a., TetR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 45.4 bits (106), Expect = 8e-10
 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 11/136 (8%)

Query: 20  ILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLEHIY----ASFN 75
           IL+AA   F++ G+ G  +  I+  A      ++YYF +K  L+I+VL +I     ++FN
Sbjct: 27  ILQAAEDEFARHGYKGTSMNTIAASAGLPKANLHYYFTNKLGLYIAVLSNILELWDSTFN 86

Query: 76  QAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQG--LHARKSQNLRAL 133
              A+      DP  AL   +    ++  R P+   I A E +  G  L    SQ+ RA 
Sbjct: 87  TLTAE-----DDPAVALTRYIRTKMEFSRRQPQASRIFAMEIISGGECLTEYFSQDYRAW 141

Query: 134 SGEAVGVLRPIIEAGQ 149
                 V +  I+AG+
Sbjct: 142 FSGRAAVFQAWIDAGK 157