Pairwise Alignments

Query, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

Subject, 213 a.a., TetR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  141 bits (356), Expect = 8e-39
 Identities = 67/203 (33%), Positives = 120/203 (59%)

Query: 9   RAQQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLE 68
           R    ++TR+NIL+ A+  F ++G +G R++ I+    ++ RMIYYYFGSKE+L++ VLE
Sbjct: 10  RKNNPEKTRENILQEAIVEFVQQGLSGARVDAIAERIHTSKRMIYYYFGSKEQLYVEVLE 69

Query: 69  HIYASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGLHARKSQ 128
            +Y      E ++ L   +P +A+R LV F +D++ ++ +FV I++ EN+H   + ++S 
Sbjct: 70  KLYGDIRTTETRMNLTALEPREAIRRLVEFTFDHHDQNVDFVRIVSIENIHNAEYVKRSD 129

Query: 129 NLRALSGEAVGVLRPIIEAGQAKGLFRDDICITHAYLMIASLCYFYNSNRHTLSSFLAVD 188
           +++A++   +  L   +  G   GLFR+ +     +L+I S  ++  SNRHT S    ++
Sbjct: 130 SIKAMNSNILEALGATLRRGAELGLFREGLEPLDVHLLINSFSFYRVSNRHTFSEIFQIE 189

Query: 189 LADKQAKADWLTFISDLALRGLR 211
           L+D+  K      I D  +R L+
Sbjct: 190 LSDEAVKQRHRDMICDSVMRYLQ 212