Pairwise Alignments

Query, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

Subject, 217 a.a., Transcriptional regulator RutR of pyrimidine catabolism (TetR family) from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 4e-12
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 4/168 (2%)

Query: 20  ILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLEHIYASFNQAEA 79
           ILKAA +VF+ +GF G RI +I+++A+     +YYY+ +KE L+ +    +   ++ A  
Sbjct: 28  ILKAASEVFAAKGFDGARIAEIASVAELPKANVYYYYATKEDLYSATFAPLLEEWDSALR 87

Query: 80  KLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGLHARKSQNLRALSGEAVG 139
            L+++  +P  ALR  V        ++P    + A E +  G     +         A  
Sbjct: 88  ILKVE-TEPAVALRAYVEAKLRLGRKNPLEARLFANEVVRGGTFLSAADRAHIAQSTAAS 146

Query: 140 VLRPIIEAGQAKGLFRDDICITHAYLMIASLCYFYNSNRHTLSSFLAV 187
           +   ++EA  A    R  I   H   M+ +   FY      +++ L V
Sbjct: 147 I--EVLEAWMAAKKIR-KIDARHFLFMLWASTQFYADYEPIVNAVLQV 191