Pairwise Alignments

Query, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

Subject, 219 a.a., Transcriptional regulator, AcrR family from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 4e-39
 Identities = 72/203 (35%), Positives = 115/203 (56%)

Query: 9   RAQQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLE 68
           R +     +  ++ AAV  F+ +GF G R++ I++ A  N +++Y+YF SK+ L++  LE
Sbjct: 16  RERDPAAAKQALIAAAVAEFASKGFAGARVDVIASEAGVNKQLVYHYFDSKQGLYLVALE 75

Query: 69  HIYASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGLHARKSQ 128
            +YA   + E KL L   +P +A+ +LVAF +DY   HPEF+ +LA EN + G H R+S+
Sbjct: 76  SVYAEIREKEQKLTLGALEPLEAMSQLVAFSFDYLAEHPEFIALLADENRNHGSHLRESE 135

Query: 129 NLRALSGEAVGVLRPIIEAGQAKGLFRDDICITHAYLMIASLCYFYNSNRHTLSSFLAVD 188
            L+ +    + +L   +E G A G+FR D    + Y+ IA + YF+ SN HTLS+     
Sbjct: 136 RLQKMHSPFIEMLEATLERGVAAGVFRPDFDAINLYISIAGISYFFFSNNHTLSAIFGKA 195

Query: 189 LADKQAKADWLTFISDLALRGLR 211
           L  + A       + + AL  LR
Sbjct: 196 LDSRGALLKRRRHVIEFALNALR 218