Pairwise Alignments

Query, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

Subject, 227 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 4e-40
 Identities = 74/205 (36%), Positives = 120/205 (58%), Gaps = 2/205 (0%)

Query: 4   RKTGVRAQQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLF 63
           RKT  R    ++TR++IL+AA+  F ++G  G R++ I+    ++ RMIYYYFGSKE+L+
Sbjct: 17  RKT--RKNNPEKTREDILQAAINEFVQQGLAGARVDAIAERTATSKRMIYYYFGSKEQLY 74

Query: 64  ISVLEHIYASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGLH 123
              L  +Y    + E  L L+    EQA+R LV F +D++ R+ +FV I+ TEN+H G +
Sbjct: 75  CECLVKLYGDIRKTEQSLDLESLPAEQAIRRLVEFTFDHHDRNVDFVRIICTENIHYGEY 134

Query: 124 ARKSQNLRALSGEAVGVLRPIIEAGQAKGLFRDDICITHAYLMIASLCYFYNSNRHTLSS 183
            ++S  +R +S   +  L   +  G  +G+FR  I +   +++++S C++  SNRHT   
Sbjct: 135 VKQSPAIREMSSLVLEALGNTLRRGVQEGVFRAGIEVIDLHMLMSSFCFYRVSNRHTFGE 194

Query: 184 FLAVDLADKQAKADWLTFISDLALR 208
              +DL+D+Q K      I D  LR
Sbjct: 195 IFQIDLSDEQIKLRHKAMICDAVLR 219