Pairwise Alignments

Query, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

Subject, 247 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 3/132 (2%)

Query: 20  ILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKLFISVLEHIYASFNQAEA 79
           I++AA   F++ GF G  +  I+  A      ++YYF +K  L+I+VL +I   ++    
Sbjct: 55  IIQAAEDEFARHGFKGTSMNTIALKAGLPKANLHYYFTNKLGLYIAVLSNIIELWDSTFN 114

Query: 80  KLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQG--LHARKSQNLRALSGEA 137
            L +D  DP +AL + +    ++  R+P+   I A E +  G  L    S + R      
Sbjct: 115 ALSVD-DDPGEALSQYIRTKMEFSRRNPQASRIFAMEVISGGTCLTEYFSADYREWFRGR 173

Query: 138 VGVLRPIIEAGQ 149
             V +  IEAG+
Sbjct: 174 AAVFQAWIEAGK 185