Pairwise Alignments

Query, 212 a.a., HTH-type transcriptional repressor NicS from Pseudomonas putida KT2440

Subject, 230 a.a., TetR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  128 bits (322), Expect = 7e-35
 Identities = 69/206 (33%), Positives = 115/206 (55%)

Query: 3   TRKTGVRAQQADRTRDNILKAAVKVFSKEGFTGGRIEQISTLAKSNDRMIYYYFGSKEKL 62
           TR++    +  +  R +IL  A+  FS+ G +G RI++I+   +++ RMIYYYFG KE L
Sbjct: 10  TRESRQAKRDPEGVRRDILSVAMDEFSQNGLSGARIDEIAARTRTSKRMIYYYFGDKEGL 69

Query: 63  FISVLEHIYASFNQAEAKLRLDLADPEQALRELVAFIWDYYVRHPEFVTILATENLHQGL 122
           +  VLE  YA     E  L LD  +P  AL +L  F ++++ R+P FV ++ TEN+H G 
Sbjct: 70  YKRVLEEAYAQVRGGEGNLELDDLEPIAALEKLCRFTFEHHRRNPAFVRMVMTENIHHGR 129

Query: 123 HARKSQNLRALSGEAVGVLRPIIEAGQAKGLFRDDICITHAYLMIASLCYFYNSNRHTLS 182
           H R S+ +R ++  A+ ++R I++ GQ  GLFR  +     +  I++L ++  SN  T S
Sbjct: 130 HIRVSEAIRNVNRPAIEIMRRILKRGQDTGLFRPGLDALELHWQISALSFYNVSNTETFS 189

Query: 183 SFLAVDLADKQAKADWLTFISDLALR 208
                 L  +  +      ++++ LR
Sbjct: 190 FNFGDTLFSEAGQEALSAHVAEMLLR 215