Pairwise Alignments

Query, 430 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 433 a.a., outer-membrane porin D from Pseudomonas putida KT2440

 Score =  303 bits (775), Expect = 9e-87
 Identities = 176/435 (40%), Positives = 250/435 (57%), Gaps = 15/435 (3%)

Query: 7   PRFSSSARLAGGCIAAAL---CAEATAEEAGFIEGARATLQARNYFFSRDYADIKGASTQ 63
           PR  S   LA G     L   CA   A+ AGF+E A A ++ARN +F+RD+ D   +S+Q
Sbjct: 3   PRMFSPFPLAPGRRVTGLFLLCAGVNAQAAGFLEDASAKIEARNVYFNRDFRDGYSSSSQ 62

Query: 64  --SRTQEWAQGFILNASSGYTQGTLGVGVDVTGLLGFKLDSSPEHARSGLLPSL--DSGK 119
             S+ +EWAQGFILN  SGYTQG +GVGVD  G+ GFKLDSSP  + SGLLPS   D  +
Sbjct: 63  GASKREEWAQGFILNVQSGYTQGPVGVGVDALGMFGFKLDSSPADSNSGLLPSSGHDPRR 122

Query: 120 SADEYSRLGAAIKFKVSQTELKVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTL 179
           SAD+Y+++G A K KVS T LK G +MP++P+L ++D RLLP  + GAML S E   L  
Sbjct: 123 SADQYAKMGLAAKVKVSNTVLKYGSMMPDVPLLKYNDGRLLPTLFHGAMLTSEELHDLKF 182

Query: 180 SAGQFRSTSLRDSSNSQKMYALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQ 239
           +  +    + RDS++ Q +        N        +D F+  G DY FN+ R S     
Sbjct: 183 TLARLDKYTARDSTDRQDIRVHCK---NKRYACDTEADHFDLAGVDYRFNE-RFSAQYQV 238

Query: 240 AQLEDIYQQRFYSFKHAEPLGSWTLGVNAGYFDAREDGSKVAGDYDNHALFSLFSAKTGG 299
           A+LE+IY+Q F     ++PL   +L  +     + + G+  AG+ D+ A   +     GG
Sbjct: 239 AKLENIYRQHFLGLVASQPLPVGSLSADMRLIKSDDIGNARAGEIDHRAFSGMLGYSLGG 298

Query: 300 HTFYVGYQQIGGDDGFIQVGANTNPMGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLT 359
           H    G+Q++ G+     +  +   + N     +F+A  ERSWQVR+DY+F ALG+PGLT
Sbjct: 299 HKLSAGWQRMYGNSAMPYLDGSNPYLVNYAQVNDFAAAQERSWQVRYDYDFKALGVPGLT 358

Query: 360 STLRYVKGRDVET-GLGFEGRDRERDLDLAYVVQSGPLAGLGIRVRNVMARSNYR---TD 415
              RY+ G +++  G   EG++ ERD +  Y VQSG    + +R+RN   RSNY     D
Sbjct: 359 FFTRYINGDNIKVPGSSVEGKEWERDTEFKYQVQSGTFKDVSVRLRNSTYRSNYERWARD 418

Query: 416 IDENRLILSYTIKVF 430
           +DE R+I+SY   +F
Sbjct: 419 MDETRVIVSYNFSIF 433