Pairwise Alignments

Query, 430 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  327 bits (838), Expect = 4e-94
 Identities = 183/425 (43%), Positives = 251/425 (59%), Gaps = 5/425 (1%)

Query: 6   APRFSSSARLAGGCIAAALCAEATAEEAGFIEGARATLQARNYFFSRDYADIKGASTQSR 65
           AP  S  AR +    A AL   A   +A F E + AT + RN +F+RD+ D   A  QS+
Sbjct: 10  APTRSFIARPSAIASALALAGVAPMSQAAFFEDSTATFETRNMYFNRDFRDGTSAQ-QSK 68

Query: 66  TQEWAQGFILNASSGYTQGTLGVGVDVTGLLGFKLDSSPEHARSGLLPSLDSGKSADEYS 125
             EWAQGFILN  SGYT GT+G G+D  G+LG KLDSSP+   SGLLP+ D GK+ADEYS
Sbjct: 69  RDEWAQGFILNFESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYS 128

Query: 126 RLGAAIKFKVSQTELKVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFR 185
           +LG   K K+SQTELK+G L+P LP L  +D R+LP T++G +L S+E  GLT + G+  
Sbjct: 129 KLGLTGKVKISQTELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRID 188

Query: 186 STSLRDSSNSQKMYALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDI 245
               R+ +N + + AL N   N      F++D     G DY F D R +     AQL+DI
Sbjct: 189 KAKDRNDTNWEDL-ALNNK--NGRFGGTFSADNLALGGLDYQFTD-RITGSYHFAQLDDI 244

Query: 246 YQQRFYSFKHAEPLGSWTLGVNAGYFDAREDGSKVAGDYDNHALFSLFSAKTGGHTFYVG 305
           Y+Q F      +P G  TLG +     + + G+  AG+ DN  +  + S   GGH     
Sbjct: 245 YRQHFIGMVATQPWGPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAA 304

Query: 306 YQQIGGDDGFIQVGANTNPMGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLTSTLRYV 365
           +QQ+ G+  F  V      + N +   +F+   ERSWQ R+DYNF ALG+PGLT   RY+
Sbjct: 305 WQQLSGESAFPYVDGADPYLVNFVQINDFAGADERSWQARYDYNFAALGVPGLTFMTRYI 364

Query: 366 KGRDVETGLGFEGRDRERDLDLAYVVQSGPLAGLGIRVRNVMARSNYRTDIDENRLILSY 425
            G +V    G EG++ ER+ +L YVVQSGPL  + +R+RN   RSN+  D DE RL++SY
Sbjct: 365 SGDNVSRAAGGEGKEWERNTELKYVVQSGPLKNVAVRLRNATFRSNFARDADEVRLLVSY 424

Query: 426 TIKVF 430
           ++ ++
Sbjct: 425 SVALW 429