Pairwise Alignments

Query, 313 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  126 bits (316), Expect = 7e-34
 Identities = 87/288 (30%), Positives = 139/288 (48%), Gaps = 10/288 (3%)

Query: 21  IQAFVSVAHKRSFVAAARALGRSPSAVTRAVQTLEDNAGSKLLNRNANAVTLTEAGERLL 80
           I  FV+VA    F AAA  LG S S ++R V  LE+   ++LL R+   VTLTEAG+  L
Sbjct: 9   IDEFVAVAECSQFTAAAERLGVSSSHISRQVARLEERLQTRLLYRSTRKVTLTEAGQTFL 68

Query: 81  PHAERLLDVQRDAADELAALSGNAQGWIRFAAPQLLGEHVLPQVLAEFSRRHPQVTLDVQ 140
            H +RL D + +A   +  L+   +G +R       GE  +  ++  F   +PQ+ +D++
Sbjct: 69  QHCQRLQDGREEALRAVGDLTSEPKGMLRMTCAVAYGERFIVPLVTRFMGLYPQLRVDIE 128

Query: 141 YSDEALDPLQGKFDFVVRGAFPQSSELIGYPLWPYRRHLYASPAYLALAGTPQHPEDLDG 200
            S+  LD +    D  +R    Q S ++   L P R +L ASP+YLA  G P    +L  
Sbjct: 129 LSNRQLDLVHEGLDLAIRLGRLQDSRMVASRLAPRRMYLCASPSYLARYGRPHSLSELSR 188

Query: 201 HTLILHTAPRILKAWHFCHNDQITSLRPRPRLRLGSGGAVYHSTLAGAGIARLAAWVGEA 260
           H  ++ ++      W    + +  S R +   R  SG AV  + L G G+ +L  +    
Sbjct: 189 HNCLIGSS----DIWQLAQDGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQLPDYYVLE 244

Query: 261 QVKAGRLVRVCPQYRLTSSSGQDPQMHAVYP-AGELPTRVRDLLAALR 307
            + +G LV +     L +    +  + A+YP    L  +VR L+  L+
Sbjct: 245 HLHSGALVSL-----LEAHQPPNTAVWALYPQQRHLSPKVRKLVDFLK 287