Pairwise Alignments

Query, 215 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 238 a.a., Phage repressor protein cI from Variovorax sp. SCN45

 Score = 48.9 bits (115), Expect = 8e-11
 Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 27/190 (14%)

Query: 3   LKDRIKAARAHANLTQGQLATQVGMDQTSISNLERGKSQGTSYIAQIASVCGVSALWLAE 62
           +  R  AAR  A +TQ Q     G+ Q+SIS +ERG +  +  +  +A        WL  
Sbjct: 4   IASRALAARKFAKMTQKQAEAVSGVKQSSISKIERGDTSRSMSVLALARAYRADPNWLDT 63

Query: 63  GTGSMLHSVSNVM---------PGPPIISPT---------RRIEIVGTAQLGNDGYWVGL 104
           G G        V          PGP  ++ T         R  + V   Q  +   W   
Sbjct: 64  GDGPAPWDEDQVRPARDRADEPPGPYRVTRTPPAGPSYNPRTPQTVPLIQWSDTVRWESR 123

Query: 105 DV-----AEGWVETWSRDE-DAYALRLKGDSMAPAIRSGWIAVCEPNHRLVPGEYVMVTT 158
           +V     AE W+   +    ++YALR++GDSM     SG +    P   ++  +    T 
Sbjct: 124 EVSDQPRAERWIPCIAHHSLESYALRMRGDSMTAT--SGHLK-SYPAESIIFVDTQRKTP 180

Query: 159 VDGQSMVKEL 168
            DGQ ++ +L
Sbjct: 181 ADGQRVIAKL 190