Pairwise Alignments

Query, 465 a.a., putative Phage DNA helicase from Pseudomonas putida KT2440

Subject, 500 a.a., Circadian clock protein KaiC from Variovorax sp. SCN45

 Score = 45.4 bits (106), Expect = 4e-09
 Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 11/72 (15%)

Query: 180 TGLPDLDDLIQG-LRGSHVIIVAGRPGTGKTTLGLGI----------AEYLTIRESKSAL 228
           TG+P LDD+  G L G HV +V G PG GKTTLGL              Y+T+ E+   L
Sbjct: 16  TGVPGLDDVTAGGLPGGHVYLVEGTPGAGKTTLGLQFLLQGRSLGQKGLYVTLSETSEEL 75

Query: 229 VFSLEMAGKELA 240
                  G +LA
Sbjct: 76  AQGAASHGWDLA 87



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 178 LSTGLPDLDDLI-QGLRGSHVIIVAGRPGTGKTTLGLGIAEYLTIRESKSALVFSLEMAG 236
           LS+G PDLD L+  GL     ++ AG  G GKTT  +      +++    A +F  +   
Sbjct: 254 LSSGNPDLDRLLGGGLTPGTNLLFAGPAGVGKTTTAVSCVR-ASLQLGGKAAIFLFDEGT 312

Query: 237 KELAKRSLA 245
           K L  RS A
Sbjct: 313 KTLLTRSRA 321