Pairwise Alignments

Query, 432 a.a., putative Phage integrase from Pseudomonas putida KT2440

Subject, 418 a.a., Prophage integrase IntA from Xanthobacter sp. DMC5

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 76/305 (24%), Positives = 122/305 (40%), Gaps = 19/305 (6%)

Query: 90  VSGMATVGQLLDWYVDRMSHDRSLSAKRKAATRAAIGQHVRPCLGDLPIKYITAELIDKH 149
           V    T G   D  + +++H    + K  A  +  +G      + D+ I  ITA  I K 
Sbjct: 97  VEAAPTFGAFADALITKLAHGFR-NEKHVAQWQMTLGPTYCTAIRDMKIADITAVDILKV 155

Query: 150 L--IWPGQAKLSLSYLRQMFGMLLTAFR-QALKLGMIDSNPMA--GVRFNDFTKAKILPK 204
           L  IW  + + + S LR     +L A + + L+ G    NP    G   +  +K + L +
Sbjct: 156 LEPIWQDKNETA-SRLRGRIERVLDAAKVEGLRSG---ENPAQWKGNLQHRLSKRQKLQR 211

Query: 205 A--ARLRSVQLPELMQQLAQAFEAAPNDAMLALMMLAHGTRIGETRMARWSEVSLAASEW 262
              A L   ++P  +  L      A      A++  A   R GE   A W+E+   A+ W
Sbjct: 212 GHHAALPYAEVPAFIVALRARQAIAARALEFAILTAA---RSGEVLGATWAEIDFKAAVW 268

Query: 263 FIPAAHTKTRTEHRLPLTAQLKALLTRYRGIQQARGYEGVYLFPNRRGHCLSETQASMVF 322
            +PA   K   EHR+PL+    ++L      ++    E  ++FP  R      T A  + 
Sbjct: 269 TVPATRMKAGREHRVPLSDAAVSVLREAEPHRRGDDPETAFVFPGLRPMRPLSTMAMEML 328

Query: 323 TRLGQGEWTSHDLRKVSRSTWT--DLGIDGHIGEMLLNHTLGKIAS-TYIHTQAMEQRKL 379
            R  +  +T H  R   R  W   +      I E  L H +G      Y    A+E+R+ 
Sbjct: 329 LRRQKQVFTVHGFRSSFRD-WAAEETSFPREIAEAALAHVVGDATERAYRRGDALEKRRD 387

Query: 380 ALEKW 384
            +  W
Sbjct: 388 MMTAW 392