Pairwise Alignments

Query, 432 a.a., putative Phage integrase from Pseudomonas putida KT2440

Subject, 418 a.a., integrase from Pseudomonas simiae WCS417

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 14/262 (5%)

Query: 128 HVRPCLGDLPIKYITAELIDKHLIWPGQAKLSLSYLRQMFGMLLTAFRQALKLGMIDSNP 187
           HV P L   P+  ITA ++ + L+ P +AK SL  ++++   L       +  G+I +NP
Sbjct: 137 HVFPDLKTTPLAKITAPMVIE-LLRPIEAKGSLETVKRLSQRLNEIMTYGVNSGLIFANP 195

Query: 188 MAGVRFNDFTKAKILPKAARLRSVQLPELMQQLAQAFEAAPNDAMLALMMLAHGTRIGET 247
           ++G+R   F K K    AA L   +LPELM +LA A        ++    L   TR  E 
Sbjct: 196 LSGIRAV-FKKPKKENMAA-LPPEELPELMLELANASIKRTTRCLIE-WQLHTMTRPAEA 252

Query: 248 RMARWSEVSLAASEWFIPAAHTKTRTEHRLPLTAQLKALLTRYRGIQQARGYEGVYLFP- 306
              RWS++      W IP    K R  H +PL+ Q  ALL     I ++      Y+FP 
Sbjct: 253 ATTRWSDIDFEKRIWTIPPERMKKRRPHSIPLSDQAMALL----DILKSHSGHREYVFPA 308

Query: 307 --NRRGHCLSETQASMVFTRLG-QGEWTSHDLRKVSRSTWTDLGIDGHIGEMLLNHT-LG 362
             N R H  S+T A+M   R+G Q    SH +R ++ +   + G D  + E+ L H    
Sbjct: 309 DRNPRTHANSQT-ANMALKRMGFQDRLVSHGMRSIASTILNEHGWDPELIEVALAHVDKD 367

Query: 363 KIASTYIHTQAMEQRKLALEKW 384
           ++ S Y     +E+R+  +  W
Sbjct: 368 EVRSAYNRADYIERRRTMMAWW 389