Pairwise Alignments

Query, 432 a.a., putative Phage integrase from Pseudomonas putida KT2440

Subject, 394 a.a., integrase from Pseudomonas simiae WCS417

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 9/264 (3%)

Query: 124 AIGQHVRPCLGDLPIKYIT-AELIDKHLIWPGQAKLSLSYLRQMFGMLLTAFRQALKLGM 182
           A+   V P LGD  I  I  A++I   LI   + + S++   ++   +   F  A+  G+
Sbjct: 126 AMALDVLPTLGDRQIDAIKRADVIA--LIRRVEKRGSVATAVKVRQRMSQVFSYAIATGV 183

Query: 183 IDSNPMAGVRFNDFTKAKILPKAARLRSVQLPELMQQLAQAFEAAPNDAMLALMMLAHGT 242
           I++NP A +        +  P    L   ++P +M  +          A L LM+    +
Sbjct: 184 IEANPTAEMHAVTEKMGQHKPHPF-LPFSEMPRIMAAIRDCASGQQLKAALMLMIYT-AS 241

Query: 243 RIGETRMARWSEVSLAASEWFIPAAHTKTRTEHRLPLTAQLKALLTRYRGIQQARGYEGV 302
           R GE R A WSE+ L A+ W  PAA  K R +H +PL+ Q  A+L     I   + Y  V
Sbjct: 242 RPGEVRHAEWSEIDLDAAIWTTPAAKMKMRRDHAVPLSTQAIAILESMLPITGDKRY--V 299

Query: 303 YLFPNRRGHCLSETQASMVFTRLG-QGEWTSHDLRKVSRSTWTDLGIDGHIGEMLLNHTL 361
           ++  N     +    A+ V    G  G  + H  R +  +     G +    E  L H  
Sbjct: 300 FINRNSTTAPIGTNYANNVMDSCGLTGIQSPHGFRHLFSTEMNGRGYNRDWIERQLAHAD 359

Query: 362 GK-IASTYIHTQAMEQRKLALEKW 384
              I   Y H   ++QR+  +++W
Sbjct: 360 SSFIRDVYNHATYLDQRRGMMQEW 383