Pairwise Alignments

Query, 432 a.a., putative Phage integrase from Pseudomonas putida KT2440

Subject, 404 a.a., Integrase from Sphingobium sp. HT1-2

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 83/356 (23%), Positives = 146/356 (41%), Gaps = 35/356 (9%)

Query: 53  KKWVPIARWPELSVAAVLAELPALRQRLMR--HPATAPV-------VSGMATVGQLLDWY 103
           +K + + R+P++ +     +    R++L     P  A +        +   T   + D +
Sbjct: 47  EKKMALGRYPDVGLKEARQKRDEAREQLEGGVDPLAARIQAKIEAEAAARTTFRVVTDEF 106

Query: 104 VDRMSHDRSLSAKRKAATRAAIGQHVRPCLGDLPIKYITA-ELIDKHLIWPGQAKLSLSY 162
           +++M  +    A  K          ++P +G  PI  I+A EL++    +  +     + 
Sbjct: 107 IEKMEREGKAPATLKKMRW--FRDELQPTIGHRPIAEISAHELLNALKRFERKGHFESAI 164

Query: 163 LRQMFGMLLTAFRQALKLGMIDSNPMAGVRFNDFTKAKILPKAARLRSVQLPELMQQLAQ 222
             + F   +  FR A+       NP   +R      A I PK     ++  P  + +L +
Sbjct: 165 RARSFSGRV--FRYAVATLRAQHNPADILR-----GALITPKVKHHAALLEPAKVGELLR 217

Query: 223 AFEAAPN--DAMLALMMLAHG-TRIGETRMARWSEVSLAASEWFIPAAHTKTRTEHRLPL 279
           A +      +  +AL +  H   R GE R A W E+   A+ W +PA  TK R  H +PL
Sbjct: 218 AIDGYGGKIETRIALQLAPHVYLRPGELRKAEWGEIDFDAAVWRVPAGRTKMRKPHAVPL 277

Query: 280 TAQLKALLTRYRGIQQARGYEGVYLFPNRRGHC--LSETQASMVFTRLG--QGEWTSHDL 335
           + Q+  LL   R    A G  G YLFP        + E   ++   RLG  + E TSH  
Sbjct: 278 STQVVTLLRELR----AMGNLGSYLFPANSTFLKPICENTLNVALRRLGFTRDEMTSHGF 333

Query: 336 RKVSRSTWTDLGI--DGHIGEMLLNHTLGKIASTYIHTQAMEQRKLALEKWHAWLD 389
           R ++ +   + G+     I   L +     + + Y H  A  + ++ + +W  W D
Sbjct: 334 RSIASTLLNESGLWHPDAIERSLAHRERDSVRAAY-HRGAHWEERVRMAQW--WSD 386