Pairwise Alignments

Query, 432 a.a., putative Phage integrase from Pseudomonas putida KT2440

Subject, 423 a.a., putative Phage integrase from Pseudomonas putida KT2440

 Score =  421 bits (1081), Expect = e-122
 Identities = 210/393 (53%), Positives = 276/393 (70%), Gaps = 3/393 (0%)

Query: 7   VKLSEAEVRRQATDKSVRDLRDPRHPGLYLRFWSSRERGTWHLVRGKKWVPIARWPELSV 66
           +K+S+AE+RRQA  + VRDLR   + GLY RF  SRERG+W+L+   KW  I  +PELS 
Sbjct: 1   MKISDAEIRRQAAGQ-VRDLRALGNHGLYFRFHRSRERGSWYLIHKGKWNLIGSYPELSA 59

Query: 67  AAVLAELPALRQRLMRHPATAPVVSGMATVGQLLDWYVDRMSHDRSLSAKRKAATRAAIG 126
           A V A LP +R RL     ++  +S     G+LLDW+ +RMS DRSLSAKRK    +AI 
Sbjct: 60  AKVAAALPDIRLRLEAGEGSS--LSSWVLTGELLDWFAERMSRDRSLSAKRKRTAASAIK 117

Query: 127 QHVRPCLGDLPIKYITAELIDKHLIWPGQAKLSLSYLRQMFGMLLTAFRQALKLGMIDSN 186
           QH+ P LG+ P+  I   L+D+ L+WP Q  LS+ Y+R +F +L  AFRQA KLG+I +N
Sbjct: 118 QHLAPRLGETPLAQIDKALLDRELMWPLQESLSIDYVRLVFQLLALAFRQAAKLGLISTN 177

Query: 187 PMAGVRFNDFTKAKILPKAARLRSVQLPELMQQLAQAFEAAPNDAMLALMMLAHGTRIGE 246
           PMAG+RF DF+KAK+  K +RLR V L +LM ++       P   +LALMML HGTR+GE
Sbjct: 178 PMAGIRFRDFSKAKVTVKPSRLRGVHLEDLMARMKSTLAHNPQHGLLALMMLCHGTRLGE 237

Query: 247 TRMARWSEVSLAASEWFIPAAHTKTRTEHRLPLTAQLKALLTRYRGIQQARGYEGVYLFP 306
           TRMARWS +SLA  EWFIPA HTKT  +HRLPLT Q++ LL   R IQ  +GYEG +LFP
Sbjct: 238 TRMARWSHISLAEREWFIPAEHTKTGVQHRLPLTDQVRFLLMACREIQLKQGYEGEFLFP 297

Query: 307 NRRGHCLSETQASMVFTRLGQGEWTSHDLRKVSRSTWTDLGIDGHIGEMLLNHTLGKIAS 366
            R+G  +SE++AS VF+ +GQGEWTSHDLRK++R+ W DLG+D  +GE+L+NH +G    
Sbjct: 298 GRQGKPMSESKASAVFSVMGQGEWTSHDLRKLARTGWADLGVDHLVGELLINHAMGHNVK 357

Query: 367 TYIHTQAMEQRKLALEKWHAWLDRIGFAAIHGL 399
            YI +  M +++ ALEKWHA LD+ GFA++HGL
Sbjct: 358 VYIQSDVMARKREALEKWHAHLDQKGFASVHGL 390