Pairwise Alignments

Query, 432 a.a., putative Phage integrase from Pseudomonas putida KT2440

Subject, 445 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 14/294 (4%)

Query: 107 MSHDRSLSAKRKAATRAAIG-------QHVRPCLGDLPIKYIT-AELIDKHLIWPGQAKL 158
           M+H   + A R +   + I         HV   LG   I+ +  ++++D  ++    AK 
Sbjct: 140 MAHSEYIEAMRSSLRASTISLKKTMFKTHVEGALGKRLIRTVRRSDVVD--VVGGVSAKG 197

Query: 159 SLSYLRQMFGMLLTAFRQALKLGMIDSNPMAGVRFNDFTKAKILPKA-ARLRSVQLPELM 217
                 ++F  ++   R   + G +D  P A  R  D   A    K  AR R +   E++
Sbjct: 198 FPVQANRVFSEVMALLRWCEQKGYVDGVPSA--RKKDVRAATGGAKELARRRVLSEGEII 255

Query: 218 QQLAQAFEAAPNDAMLALMMLAHGTRIGETRMARWSEVSLAASEWFIPAAHTKTRTEHRL 277
                             ++L  G R  E R+  W EV + AS W IPA+  KT   H +
Sbjct: 256 AVWNLTANMGDLTGDFLRLLLLTGQRRDEVRLMVWGEVDMDASLWTIPASRYKTGYSHTV 315

Query: 278 PLTAQLKALLTRYRGIQQARGYEGVYLFPNRRGHCLSETQASMVFTRLGQGEWTSHDLRK 337
           PL  Q   +L R R ++ A GY       N+  +  +     +     G+ ++T HD+R+
Sbjct: 316 PLPKQAMDIL-RSRWVEGATGYVLAGRGENKPFNGAASAVRRLRKELGGKADFTLHDIRR 374

Query: 338 VSRSTWTDLGIDGHIGEMLLNHTLGKIASTYIHTQAMEQRKLALEKWHAWLDRI 391
             R+    +GID    EM++ H    I   Y     ME+R+ AL++W  +++R+
Sbjct: 375 TLRTGLARMGIDETTAEMVIGHIPQGIVKVYDQHDRMEERRTALKRWAEYVERV 428