Pairwise Alignments

Query, 602 a.a., putative Phage terminase, large subunit from Pseudomonas putida KT2440

Subject, 561 a.a., putative Phage terminase, large subunit from Pseudomonas putida KT2440

 Score =  221 bits (564), Expect = 5e-62
 Identities = 167/591 (28%), Positives = 273/591 (46%), Gaps = 51/591 (8%)

Query: 17  ATQYAKEVHSGERVAGPDIRNACARHLRDLEEGPKRGLTWDLDAAN--KAIRFYRTVLKL 74
           A +YAK+V +G+ +    I     RHL DL    ++   +  D A   K  +F + +L  
Sbjct: 4   AEKYAKDVVAGKILVCKWIMLLAQRHLDDLAVSKRKDFPYKFDPAKAEKVAKFLQ-LLPH 62

Query: 75  NGGEFEGLP--FELLPWQKFIVGSIFGW-KSSDGYRRFRVVYVESGKGSGKSPLAAGVGL 131
             G++ G     +L PWQ F V   FGW +  DG RR+R + V   + +GKS +  GVGL
Sbjct: 63  TKGKWGGKKQLIKLEPWQLFSVCVPFGWVRKKDGTRRYRTILVFVPRKNGKSIIGGGVGL 122

Query: 132 TGLIADNEARAEIYAAATKKDQAMILFRDAVAMVQQSPELTKRLVCSGTGQNIWNLAYLK 191
              +AD E  AE+Y+ AT + QA  +FR A  MV+++ +L +     G   N  N+  L 
Sbjct: 123 YMFVADGEFGAEVYSGATTEKQAWEVFRPAKLMVERTDDLREHY---GVDVNASNMVVLA 179

Query: 192 SGSFFRPISSDDGQSGPRPHMALIDEVHEHKTNMVVEMMRAGTKSRKQALIFMITNSGSN 251
            GS F P+    G  G  P  +++DE HEH+ + + + M  G  +R+Q ++ +IT +GS+
Sbjct: 180 DGSRFEPVIGKPGD-GSSPSCSVVDEYHEHQDSTLYDTMETGMGAREQPIMLVITTAGSS 238

Query: 252 KRGPCWEYHEYGSRVASGALTDDGFFAYICSLDEGDDPIQDESCWFKSNPSLQDADLPGM 311
             GPC +      R+  G +     +  + ++D+GDD    E    K+NP+   +     
Sbjct: 239 IGGPCHQLIRDSERMLEGVIDRPDLWPALYTIDQGDD-WTSEIALRKANPNFGISVAEDF 297

Query: 312 KYLREQVTEARGMPSKEAMVRRLNFCEWTGAESPWISWDVWSQAEERVPMSLLRNRPSVG 371
              R++  +A    +K+A  R  +  EW GA++ W++   W +A  R  ++ L  R   G
Sbjct: 298 LLARQR--DAMQSATKQATFRTKHLNEWVGAKNAWLNMLRWKEAPVRKSLAELEGRSCYG 355

Query: 372 GLDLSSTTDLTSFVLLFYPTYEDPHWRLLPYFWIPD----HELDKREARDKVPYAAWIKS 427
            LDL+S  D+ + +L+F P  +DP W +   +++P+     ELD   AR    Y  +   
Sbjct: 356 SLDLASKIDIAANLLIFPPHGDDPFWHIHARYYLPEARVLEELDSNTAR----YREFDAL 411

Query: 428 RDLETTPGRAISKLHVLRRLQTICDFFQVDKIAFDRWRIEDMRQLMSEYDITLPELVEFG 487
             L  T G       +   ++     F +   A+D W+     QL  E D     +VE  
Sbjct: 412 GLLTLTDGEVTDFEVIKEDMREFAGRFDIRAYAYDPWQ---ATQLAQEMDAEGLPMVELR 468

Query: 488 QGFKDMGPAVDEFERRLLGMIEQQPEEEGGAAEFFDDALPAEAVESLRHDGNPVMTWCAG 547
           Q  +++   + E E  +L                            L H   PV+TW A 
Sbjct: 469 QTVQNLSEPMKEVEALVL-------------------------QRKLAHGDCPVLTWMAS 503

Query: 548 NAVIVSDPANNRKADKAKATGRIDGIIAAIMATGISGAVSSGSSGSSIYDE 598
           N V   D  +N   +K +   +IDG+++ I  TG + A+  G   S  +D+
Sbjct: 504 NVVAKLDVKDNIYPNKERPENKIDGMVSLI--TGCAVAIKLGIDDSGHFDD 552