Pairwise Alignments

Query, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 449 a.a., Group II intron-encoded protein LtrA from Alteromonas macleodii MIT1002

 Score =  358 bits (919), Expect = e-103
 Identities = 186/416 (44%), Positives = 265/416 (63%), Gaps = 9/416 (2%)

Query: 55  LMERVLAPANLRRAYQRVVSNKGAPGADGITVADLAGYVKQ-YWPTLKARLLAGEYHPQA 113
           L+E  L P+NL  A+++V +NKGA G DG+T+ D   +     W  +   L +G+Y P  
Sbjct: 28  LLELFLQPSNLVSAWKQVRANKGAAGMDGMTIDDFPAWANAGNWKRVMTELRSGQYQPSP 87

Query: 114 VRAVEIPKPQGGTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIE 173
           V+ VEI KP GG RQLGIP++VDR+IQQA+ Q LTPIFDP FSD S+GFRP R+  QA++
Sbjct: 88  VKRVEIDKPDGGKRQLGIPTIVDRVIQQAIAQVLTPIFDPTFSDNSFGFRPHRNGQQAVK 147

Query: 174 MARAHVTAGHRWCVEIDLEKFFDRVNHDILMACIERRVKDKCVLRLIRRYLEAGIM---- 229
              + +  G R+ V++DL KFFDRVNHD+LM  +  +VKDK +L+LI+RYL AGI+    
Sbjct: 148 QVNSIIKTGRRFAVDVDLSKFFDRVNHDLLMTYLGYKVKDKRLLKLIKRYLRAGILCKTK 207

Query: 230 -SGGVVSPRQEGTPQGGPLSPLLSNILLDELDRELERRGHRFVRYADDANIYVRSPRAGE 288
               + S  +EG PQGGPLSPLL+NI+LD LD+ELE+RGH F RYADD  I V++PR+GE
Sbjct: 208 GDNQLYSESREGVPQGGPLSPLLANIMLDPLDKELEKRGHEFARYADDFTILVKTPRSGE 267

Query: 289 RVLVSVERFLRERLKLTVNRKKSQVARAWKCDYLGYGMSWHQQPRLRVARMSLDRLRDRL 348
           RVL S+ RFL  RLKL VN  KS V +  +  +LG+     +  R++    +L + + ++
Sbjct: 268 RVLNSISRFLCHRLKLVVNTTKSHVVKTSESKFLGFTF---KAGRIQWYPKTLMKFKQQV 324

Query: 349 RMLLRSVRARKMATVIERINPVLRGWASYFKLSQSKRPLEELDGWVRHKLRCVIWRQWKQ 408
           R L        M   + +++  LRGW +YF ++   +   ELD W+R ++R   WRQW++
Sbjct: 325 RRLTNRNWGVSMQYQLFKLSQYLRGWINYFGIASGYQRCVELDHWIRRRVRMAYWRQWRK 384

Query: 409 PPTRLRNLMRLGLSEERANKSAFNGRGPWWNSGAQHMNYALPKKLWDRLGLVSILD 464
           P T++R+LMRLG+  + A       +GPW ++ +  +N AL        GL S+ D
Sbjct: 385 PRTKVRHLMRLGVHVQAAVACGITSKGPWRSAKSPGINQALSLDYLKSEGLYSLRD 440