Pairwise Alignments

Query, 369 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  360 bits (924), Expect = e-104
 Identities = 169/364 (46%), Positives = 257/364 (70%), Gaps = 3/364 (0%)

Query: 7   MQFALVSLFSFGVVCAEAGDAQKPS--VHIYNWYDYIAPNTVKDFQKEAGVSVVYDVFDN 64
           M+ A  +L +  ++ A AG AQ     +H+YNW DYIAP+T+ +F+KE+G+ VVYDVFD+
Sbjct: 1   MKNAGKTLLALSLMGAMAGAAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDS 60

Query: 65  SEVMQSKLMAGRSGYDVVVASADLLPNLIKAGVLKRLDRSKLPNWSHLDPDVLAKLQSND 124
           +E +++KL+AG+SGYD+VV S + L   IKAGV + LD+SKL N+ +L+  +L  +  +D
Sbjct: 61  NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSD 120

Query: 125 PGNSYAAPYLWGTTGIGYDADKVKSLLGPDAPVNSWDLIFKEENLAKLRQCGVAMLDAPG 184
           P N +A PY+WG+ GIGY+ +KVK+ LG D  ++SWD++ K EN+AKL+ CGV+ LD+P 
Sbjct: 121 PDNKHAFPYMWGSIGIGYNPEKVKAALGVDK-IDSWDVLLKPENIAKLKSCGVSFLDSPT 179

Query: 185 EVIPIALHYLGLPYNSHNPDDYKKAQELLLKLRPHIAYFDSSRFISDLANGNVCVVLGWA 244
           E++P+ALHYLGLP ++    D K+A++L LK+RP I YF SS++ISDLANGN+CV +G++
Sbjct: 180 EMLPVALHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYS 239

Query: 245 GGVSDAQKASELAGNHRNLVYSIPREGAPVWVESMVQLNDAPNPEQGLAFINYMLRPEVI 304
           G +  A+  +  AG    + Y IP+EGA  + + +    DA N +    F+NY+L+P+V+
Sbjct: 240 GDIEQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVM 299

Query: 305 AESSNYLSYPNANKDATALVEKKIRDNPGVYPSKDVLSTLFPLEPLPLKLERIRTRAWNT 364
           AE +N + +PN N+ ATALV+K+I  +PG+YP  DV + L+ +  LP   +R  TR+W  
Sbjct: 300 AEITNSVHFPNGNEKATALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTK 359

Query: 365 VKTG 368
           +K+G
Sbjct: 360 IKSG 363