Pairwise Alignments

Query, 369 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  362 bits (929), Expect = e-105
 Identities = 172/339 (50%), Positives = 241/339 (71%), Gaps = 1/339 (0%)

Query: 30  PSVHIYNWYDYIAPNTVKDFQKEAGVSVVYDVFDNSEVMQSKLMAGRSGYDVVVASADLL 89
           P+VHIYNW DYI  +T+ +F+K +G+  VYDVFD++E ++ KL+AGR+GYDVVV S   L
Sbjct: 26  PTVHIYNWSDYIGTDTLANFEKASGIKPVYDVFDSNETLEGKLLAGRTGYDVVVPSNHFL 85

Query: 90  PNLIKAGVLKRLDRSKLPNWSHLDPDVLAKLQSNDPGNSYAAPYLWGTTGIGYDADKVKS 149
              IKAG  ++LD+S L N+++LDP +L +L+ NDPGN YA PYLWGT GIGY+ DK K 
Sbjct: 86  GKQIKAGAFQKLDKSLLTNYANLDPALLKRLEKNDPGNQYAVPYLWGTNGIGYNGDKGKE 145

Query: 150 LLGPDAPVNSWDLIFKEENLAKLRQCGVAMLDAPGEVIPIALHYLGLPYNSHNPDDYKKA 209
           +LG D  ++SW ++F+ EN+ KL  CGV+ +D+  E++P  L+Y+GL  NS NPDDYKKA
Sbjct: 146 VLGVDH-IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGLNPNSTNPDDYKKA 204

Query: 210 QELLLKLRPHIAYFDSSRFISDLANGNVCVVLGWAGGVSDAQKASELAGNHRNLVYSIPR 269
           +E LLK+RP++ YF SS++ISDLANGN+CV  G++G V  A+  +  AG   N+ Y+IP+
Sbjct: 205 EEKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYTIPK 264

Query: 270 EGAPVWVESMVQLNDAPNPEQGLAFINYMLRPEVIAESSNYLSYPNANKDATALVEKKIR 329
           EG  +W + +    DA N ++  AFINY+L+PEVIA+ S+Y+ Y N N  A  L+E+ IR
Sbjct: 265 EGGNLWFDVLAIPKDATNVKEAHAFINYLLQPEVIAQVSDYVGYANPNPGADKLMEQSIR 324

Query: 330 DNPGVYPSKDVLSTLFPLEPLPLKLERIRTRAWNTVKTG 368
            +  VYP + VL   F    LP K++R+ TR+W  VKTG
Sbjct: 325 TDEAVYPPQAVLDRTFVNFELPPKVQRLMTRSWTKVKTG 363