Pairwise Alignments

Query, 369 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 362 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  350 bits (897), Expect = e-101
 Identities = 173/356 (48%), Positives = 245/356 (68%), Gaps = 4/356 (1%)

Query: 14  LFSFGVVCAEAGDAQK-PSVHIYNWYDYIAPNTVKDFQKEAGVSVVYDVFDNSEVMQSKL 72
           LF   +V A +  +Q  P+V +YNW DYI   T+ DFQ + G+  +YDVFD++E ++ KL
Sbjct: 7   LFPLALVAAFSSASQAAPTVSVYNWTDYIGETTLADFQAKTGIKPIYDVFDSNETLEGKL 66

Query: 73  MAGRSGYDVVVASADLLPNLIKAGVLKRLDRSKLPNWSHLDPDVLAKLQSNDPGNSYAAP 132
           +AGR+GYDVVV S   L   +KAG   +LDR++LPN+ +LDP +L  L+ NDPGN+++ P
Sbjct: 67  LAGRTGYDVVVPSNHFLARQVKAGAFLKLDRAQLPNFKNLDPKLLKLLEKNDPGNAHSVP 126

Query: 133 YLWGTTGIGYDADKVKSLLGPDAPVNSWDLIFKEENLAKLRQCGVAMLDAPGEVIPIALH 192
           YLWGT GIGY+ DKVK +LG DA ++SW ++F+ EN+ KL QCGVA LD+  E+ P  L+
Sbjct: 127 YLWGTNGIGYNVDKVKEVLGIDA-IDSWAVLFEPENIKKLNQCGVAFLDSADELFPAILN 185

Query: 193 YLGLPYNSHNPDDYKKAQELLLKLRPHIAYFDSSRFISDLANGNVCVVLGWAGGVSDAQK 252
           Y+G    S NP+DYK+A+  LL LRP+I YF SS++ISDLANGN+CV  G++G V  A  
Sbjct: 186 YMGKDPRSENPEDYKQAEAKLLTLRPYITYFHSSKYISDLANGNICVAFGYSGDVFQAAN 245

Query: 253 ASELAGNHRNLVYSIPREGAPVWVESMVQLNDAPNPEQGLAFINYMLRPEVIAESSNYLS 312
            ++ A N   + YSIP+EG+ +W + +    DA +P++  AFINY+L P+VIA+ S  + 
Sbjct: 246 RAKEAKNGVKIAYSIPKEGSNLWFDLLAIPADASHPKEAHAFINYLLDPQVIAKVSASVG 305

Query: 313 YPNANKDATALVEKKIRDNPGVYPSKDVLSTLF-PLEPLPLKLERIRTRAWNTVKT 367
           Y NAN  A A ++ ++ +NP VYPS+DVL  L+    P P  + R+ TRAW+ VKT
Sbjct: 306 YANANPAAKAFMDPELVNNPEVYPSQDVLDKLYISTTPTPATM-RLMTRAWSKVKT 360